RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 ACOX2Q99424 681 aa5.55□□□□□ -1.52
CD46-211ENST00000464082 CRACR2AQ9BSW2 395 aa5.55□□□□□ -1.52
CD46-211ENST00000464082 UCKL1Q9NWZ5 548 aa5.55□□□□□ -1.52
CD46-211ENST00000464082 DLL3Q9NYJ7 618 aa5.55□□□□□ -1.52
CD46-211ENST00000464082 TBC1D14Q9P2M4 693 aa5.55□□□□□ -1.52
CD46-211ENST00000464082 TRPS1Q9UHF7 1281 aa5.55□□□□□ -1.52
CD46-211ENST00000464082 RASAL2Q9UJF2 1139 aa5.55□□□□□ -1.52
CD46-211ENST00000464082 AGO1Q9UL18 857 aaKnown RBP5.55□□□□□ -1.52
CD46-211ENST00000464082 MMP17Q9ULZ9 603 aa5.55□□□□□ -1.52
CD46-211ENST00000464082 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.55□□□□□ -1.52
CD46-211ENST00000464082 TRPM6Q9BX84 2022 aa5.55□□□□□ -1.52
CD46-211ENST00000464082 A0A0A6YYK5 440 aaPredicted RBP5.54□□□□□ -1.52
CD46-211ENST00000464082 A0A1W2PQF6 199 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 GTPBP10A4D1E9 387 aaKnown RBP5.54□□□□□ -1.52
CD46-211ENST00000464082 NEDD8-MDP1E9PL57 170 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 M0QYV0 167 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 DCLK1O15075 740 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 MSI1O43347 362 aaKnown RBP5.54□□□□□ -1.52
CD46-211ENST00000464082 ATG13O75143 517 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 AMY2AP04746 511 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 PNMA6AP0CW24 399 aaPredicted RBP5.54□□□□□ -1.52
CD46-211ENST00000464082 TYRP14679 529 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 CD19P15391 556 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 AMY2BP19961 511 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 HOXD9P28356 352 aaPredicted RBP5.54□□□□□ -1.52
CD46-211ENST00000464082 CORO1AP31146 461 aaKnown RBP5.54□□□□□ -1.52
CD46-211ENST00000464082 TNFRSF4P43489 277 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 RGS7P49802 495 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 MFAP3P55082 362 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 YWHAGP61981 247 aaKnown RBP eCLIP5.54□□□□□ -1.52
CD46-211ENST00000464082 YWHAEP62258 255 aaKnown RBP5.54□□□□□ -1.52
CD46-211ENST00000464082 PITX1P78337 314 aaPredicted RBP5.54□□□□□ -1.52
CD46-211ENST00000464082 EIF4EBP2Q13542 120 aaPredicted RBP5.54□□□□□ -1.52
CD46-211ENST00000464082 ENPP2Q13822 863 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 SIM2Q14190 667 aaPredicted RBP5.54□□□□□ -1.52
CD46-211ENST00000464082 CRY1Q16526 586 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 PLK5Q496M5 336 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 FAM133BQ5BKY9 247 aaKnown RBP5.54□□□□□ -1.52
CD46-211ENST00000464082 RABL3Q5HYI8 236 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 C10orf120Q5SQS8 335 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 BSPRYQ5W0U4 402 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 EGFLAMQ63HQ2 1017 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 DENND1BQ6P3S1 775 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 TPGS1Q6ZTW0 290 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 PTRH1Q86Y79 214 aaKnown RBP5.54□□□□□ -1.52
CD46-211ENST00000464082 FMNL3Q8IVF7 1028 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 CPXM2Q8N436 756 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 WDTC1Q8N5D0 677 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 CCDC33Q8N5R6 958 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 FRMD1Q8N878 549 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 MLKLQ8NB16 471 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 WFDC5Q8TCV5 224 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 ZNF606Q8WXB4 792 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 SHC3Q92529 594 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 ZC3H10Q96K80 434 aaKnown RBP5.54□□□□□ -1.52
CD46-211ENST00000464082 LMLNQ96KR4 655 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 ZFYVE21Q9BQ24 234 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 BBS2Q9BXC9 721 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 NUP62CLQ9H1M0 184 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 OR10A5Q9H207 317 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 HSD3B7Q9H2F3 369 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 CD93Q9NPY3 652 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 CNGB3Q9NQW8 809 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 ARHGEF4Q9NR80 690 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 RXFP3Q9NSD7 469 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 SAMSN1Q9NSI8 373 aaKnown RBP5.54□□□□□ -1.52
CD46-211ENST00000464082 PLK2Q9NYY3 685 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 SFMBT1Q9UHJ3 866 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 STOML2Q9UJZ1 356 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 KIAA1257Q9ULG3 409 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 ATP23Q9Y6H3 246 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 SHROOM3Q8TF72 1996 aa5.54□□□□□ -1.52
CD46-211ENST00000464082 CHD8Q9HCK8 2581 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 MYLKQ15746 1914 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 SLC12A8A0AV02 714 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 PRAMEF25A6NGN4 478 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.53□□□□□ -1.52
CD46-211ENST00000464082 PAPSS1O43252 624 aaPredicted RBP5.53□□□□□ -1.52
CD46-211ENST00000464082 LRP3O75074 770 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 RPP40O75818 363 aaKnown RBP5.53□□□□□ -1.52
CD46-211ENST00000464082 EPN2O95208 641 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 GJB6O95452 261 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 KLF8O95600 359 aaPredicted RBP5.53□□□□□ -1.52
CD46-211ENST00000464082 APBB3O95704 486 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 IGLV3-25P01717 112 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 APODP05090 189 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 RETP07949 1114 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 HMBSP08397 361 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 CCDC192P0DO97 292 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 RALAP11233 206 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 GABRG2P18507 467 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 ERCC5P28715 1186 aaPredicted RBP5.53□□□□□ -1.52
CD46-211ENST00000464082 CD38P28907 300 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 SLC6A4P31645 630 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 ID4P47928 161 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 CLK3P49761 638 aaKnown RBP5.53□□□□□ -1.52
CD46-211ENST00000464082 COG7P83436 770 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 TAF5Q15542 800 aa5.53□□□□□ -1.52
CD46-211ENST00000464082 ELAVL1Q15717 326 aaKnown RBP5.53□□□□□ -1.52
CD46-211ENST00000464082 MEA1Q16626 185 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms