RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 CACNA2D3Q8IZS8 1091 aa4.25□□□□□ -1.73
ITGB1-208ENST00000464001 NEK9Q8TD19 979 aa4.25□□□□□ -1.73
ITGB1-208ENST00000464001 CSGALNACT1Q8TDX6 532 aa4.25□□□□□ -1.73
ITGB1-208ENST00000464001 TMEM255BQ8WV15 326 aa4.25□□□□□ -1.73
ITGB1-208ENST00000464001 CD101Q93033 1021 aa4.25□□□□□ -1.73
ITGB1-208ENST00000464001 SDCCAG3Q96C92 435 aa4.25□□□□□ -1.73
ITGB1-208ENST00000464001 RSRC1Q96IZ7 334 aaKnown RBP4.25□□□□□ -1.73
ITGB1-208ENST00000464001 CHCHD6Q9BRQ6 235 aa4.25□□□□□ -1.73
ITGB1-208ENST00000464001 ENTPD7Q9NQZ7 604 aa4.25□□□□□ -1.73
ITGB1-208ENST00000464001 MRGBPQ9NV56 204 aa4.25□□□□□ -1.73
ITGB1-208ENST00000464001 GRHPRQ9UBQ7 328 aa4.25□□□□□ -1.73
ITGB1-208ENST00000464001 TTLL3Q9Y4R7 772 aa4.25□□□□□ -1.73
ITGB1-208ENST00000464001 PCDHAC2Q9Y5I4 1007 aa4.25□□□□□ -1.73
ITGB1-208ENST00000464001 SLC25A17O43808 307 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 PLOD3O60568 738 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 AFPP02771 609 aaKnown RBP4.24□□□□□ -1.73
ITGB1-208ENST00000464001 VEGFAP15692 232 aaPredicted RBP4.24□□□□□ -1.73
ITGB1-208ENST00000464001 DGKAP23743 735 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 TSPAN7P41732 249 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 AARSP49588 968 aaKnown RBP eCLIP4.24□□□□□ -1.73
ITGB1-208ENST00000464001 ARSFP54793 590 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 ROR1Q01973 937 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 SLC18A2Q05940 514 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 ARL16Q0P5N6 197 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 POSTNQ15063 836 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 ZNF484Q5JVG2 852 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 STPG1Q5TH74 334 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 CCDC30Q5VVM6 783 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 TUBA1AQ71U36 451 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 MON1AQ86VX9 555 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 CCDC105Q8IYK2 499 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 MAB21L3Q8N8X9 362 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 SECTM1Q8WVN6 248 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 SORCS1Q8WY21 1168 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 RUBCNQ92622 972 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 USP13Q92995 863 aaPredicted RBP4.24□□□□□ -1.73
ITGB1-208ENST00000464001 OTULINQ96BN8 352 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 MASTLQ96GX5 879 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 TUBA1CQ9BQE3 449 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 CTDSP1Q9GZU7 261 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 UNC45AQ9H3U1 944 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 EVA1AQ9H8M9 152 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 UBTD1Q9HAC8 227 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 ZCCHC17Q9NP64 241 aaKnown RBP4.24□□□□□ -1.73
ITGB1-208ENST00000464001 SAYSD1Q9NPB0 183 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 ANKRD10Q9NXR5 420 aa4.24□□□□□ -1.73
ITGB1-208ENST00000464001 IGHV4OR15-8A0A075B7B6 117 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 B4E171 279 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 NPIPB11E5RHQ5 1161 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 TFPIP10646 304 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 ANOS1P23352 680 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 SSTR2P30874 369 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 ELF1P32519 619 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 UBA7P41226 1012 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 LIFRP42702 1097 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 PRKAA2P54646 552 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 TROAPQ12815 778 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 TAF12Q16514 161 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 SH2D4BQ5SQS7 431 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 PMS2CLQ68D20 193 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 CCDC129Q6ZRS4 1044 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 HEATR4Q86WZ0 1026 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 TMTC1Q8IUR5 882 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 ESX1Q8N693 406 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 DNAAF1Q8NEP3 725 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 LINS1Q8NG48 757 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 WBP2Q969T9 261 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 RBM17Q96I25 401 aaKnown RBP4.23□□□□□ -1.73
ITGB1-208ENST00000464001 FEM1CQ96JP0 617 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 ZMAT2Q96NC0 199 aaKnown RBP4.23□□□□□ -1.73
ITGB1-208ENST00000464001 UHRF2Q96PU4 802 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 YME1L1Q96TA2 773 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 TTC12Q9H892 705 aaPredicted RBP4.23□□□□□ -1.73
ITGB1-208ENST00000464001 CHODLQ9H9P2 273 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 SPATS2LQ9NUQ6 558 aaKnown RBP4.23□□□□□ -1.73
ITGB1-208ENST00000464001 NKIRAS2Q9NYR9 191 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 SMARCAL1Q9NZC9 954 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 SRP68Q9UHB9 627 aaKnown RBP4.23□□□□□ -1.73
ITGB1-208ENST00000464001 CD207Q9UJ71 328 aa4.23□□□□□ -1.73
ITGB1-208ENST00000464001 ANKRD18BA2A2Z9 1011 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 A6NLC8 198 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 HNRNPCL2B2RXH8 293 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 J3KR12 359 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 PMS2P2O95744 297 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 DDX58O95786 925 aaKnown RBP4.22□□□□□ -1.73
ITGB1-208ENST00000464001 TBX18O95935 607 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 ADAP00813 363 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 FAM200BP0CF97 657 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 HOXC13P31276 330 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 TTKP33981 857 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 KRT9P35527 623 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 HNF1BP35680 557 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 CLK1P49759 484 aaKnown RBP4.22□□□□□ -1.73
ITGB1-208ENST00000464001 RBM39Q14498 530 aaKnown RBP4.22□□□□□ -1.73
ITGB1-208ENST00000464001 TIGD6Q17RP2 521 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 CBWD5Q5RIA9 395 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 FAM69BQ5VUD6 431 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 ZNF449Q6P9G9 518 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 GDPD4Q6W3E5 623 aa4.22□□□□□ -1.73
ITGB1-208ENST00000464001 SFTPA2Q8IWL1 248 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms