RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 SLC30A5Q8TAD4 765 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 PTCD2Q8WV60 388 aaKnown RBP15.79■□□□□ 0.12
SND1-203ENST00000463020 TMEM74Q96NL1 305 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 LGR4Q9BXB1 951 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 NAT10Q9H0A0 1025 aaKnown RBP15.79■□□□□ 0.12
SND1-203ENST00000463020 TMEM168Q9H0V1 697 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 RDH14Q9HBH5 336 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 ANO10Q9NW15 660 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 APPL1Q9UKG1 709 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 ZKSCAN5Q9Y2L8 839 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 UNC13CQ8NB66 2214 aa15.79■□□□□ 0.12
SND1-203ENST00000463020 ZFC3H1O60293 1989 aaKnown RBP15.78■□□□□ 0.12
SND1-203ENST00000463020 GOLGA6L19H0YKK7 550 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 TOR1BO14657 336 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 B4GAT1O43505 415 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 LSM8O95777 96 aaKnown RBP15.78■□□□□ 0.12
SND1-203ENST00000463020 IGSF6O95976 241 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 ETFBP38117 255 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 KLK7P49862 253 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 BLKP51451 505 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 MAZP56270 477 aaKnown RBP15.78■□□□□ 0.12
SND1-203ENST00000463020 GEMIN4P57678 1058 aaKnown RBP15.78■□□□□ 0.12
SND1-203ENST00000463020 B4GALNT1Q00973 533 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 RALGDSQ12967 914 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 PTP4A2Q12974 167 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 UGP2Q16851 508 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 ARCQ7LC44 396 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 ZNF354CQ86Y25 554 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 PTRH1Q86Y79 214 aaKnown RBP15.78■□□□□ 0.12
SND1-203ENST00000463020 RCBTB1Q8NDN9 531 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 FAM46DQ8NEK8 389 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 FAM172AQ8WUF8 416 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 SCG3Q8WXD2 468 aaKnown RBP15.78■□□□□ 0.12
SND1-203ENST00000463020 CENPIQ92674 756 aaPredicted RBP15.78■□□□□ 0.12
SND1-203ENST00000463020 WDR92Q96MX6 357 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 NUDT22Q9BRQ3 303 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 C11orf70Q9BRQ4 267 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 C1QTNF7Q9BXJ2 289 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 NDST4Q9H3R1 872 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 CBX8Q9HC52 389 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 LRIT1Q9P2V4 623 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 HPCAL4Q9UM19 191 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 DGKBQ9Y6T7 804 aa15.78■□□□□ 0.12
SND1-203ENST00000463020 RASA4BC9J798 803 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 F8VZ95 297 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 J3KR12 359 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 RASA4O43374 803 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 FUCA1P04066 466 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 GLB1P16278 677 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 MMP8P22894 467 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 ZNF165P49910 485 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 OR1D5P58170 312 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 BPIFB4P59827 614 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 FMO1Q01740 532 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 SERINC3Q13530 473 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 MAN2A1Q16706 1144 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 C14orf28Q4W4Y0 310 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 VWA3BQ502W6 1294 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 PHF19Q5T6S3 580 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 SPECC1LQ69YQ0 1117 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 TAF8Q7Z7C8 310 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 NRROSQ86YC3 692 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 CAMK1DQ8IU85 385 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 RTL3Q8N8U3 475 aaKnown RBP15.77■□□□□ 0.12
SND1-203ENST00000463020 PCDHB18PQ96TA0 734 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 SEMA3CQ99985 751 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 SLC12A9Q9BXP2 914 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 PDFQ9HBH1 243 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 SPATS2LQ9NUQ6 558 aaKnown RBP15.77■□□□□ 0.12
SND1-203ENST00000463020 KIAA1468Q9P260 1216 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 DAAM1Q9Y4D1 1078 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 ST14Q9Y5Y6 855 aa15.77■□□□□ 0.12
SND1-203ENST00000463020 USP9YO00507 2555 aaPredicted RBP15.76■□□□□ 0.11
SND1-203ENST00000463020 USP9XQ93008 2570 aaPredicted RBP15.76■□□□□ 0.11
SND1-203ENST00000463020 TMEM110-MUSTN1A8MSY1 372 aa15.76■□□□□ 0.11
SND1-203ENST00000463020 TMX2-CTNND1H3BSU7 103 aa15.76■□□□□ 0.11
SND1-203ENST00000463020 ZNF500O60304 480 aaPredicted RBP15.76■□□□□ 0.11
SND1-203ENST00000463020 TNFP01375 233 aa15.76■□□□□ 0.11
SND1-203ENST00000463020 CYP1A1P04798 512 aaPredicted RBP15.76■□□□□ 0.11
SND1-203ENST00000463020 UCHL3P15374 230 aa15.76■□□□□ 0.11
SND1-203ENST00000463020 SDC4P31431 198 aa15.76■□□□□ 0.11
SND1-203ENST00000463020 RFC1P35251 1148 aaPredicted RBP15.76■□□□□ 0.11
SND1-203ENST00000463020 PTPN9P43378 593 aa15.76■□□□□ 0.11
SND1-203ENST00000463020 AGERQ15109 404 aa15.76■□□□□ 0.11
SND1-203ENST00000463020 SKIDA1Q1XH10 827 aa15.76■□□□□ 0.11
SND1-203ENST00000463020 AMZ1Q400G9 498 aa15.76■□□□□ 0.11
SND1-203ENST00000463020 PATE1Q8WXA2 126 aa15.76■□□□□ 0.11
SND1-203ENST00000463020 EPN3Q9H201 632 aa15.76■□□□□ 0.11
SND1-203ENST00000463020 SUV39H2Q9H5I1 410 aa15.76■□□□□ 0.11
SND1-203ENST00000463020 SUDS3Q9H7L9 328 aaPredicted RBP15.76■□□□□ 0.11
SND1-203ENST00000463020 NBASA2RRP1 2371 aa15.76■□□□□ 0.11
SND1-203ENST00000463020 A8MX80 341 aa15.75■□□□□ 0.11
SND1-203ENST00000463020 EPHB6O15197 1021 aa15.75■□□□□ 0.11
SND1-203ENST00000463020 RECQL5O94762 991 aaPredicted RBP15.75■□□□□ 0.11
SND1-203ENST00000463020 GFPT2O94808 682 aa15.75■□□□□ 0.11
SND1-203ENST00000463020 FGF3P11487 239 aaPredicted RBP15.75■□□□□ 0.11
SND1-203ENST00000463020 HTR1BP28222 390 aa15.75■□□□□ 0.11
SND1-203ENST00000463020 EPHB2P29323 1055 aa15.75■□□□□ 0.11
SND1-203ENST00000463020 KIAA1024LP59773 190 aa15.75■□□□□ 0.11
SND1-203ENST00000463020 ELP6Q0PNE2 266 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms