RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 HM13Q8TCT9 377 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 CALML6Q8TD86 181 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 RNF34Q969K3 372 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 PBXIP1Q96AQ6 731 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 ZNF512Q96ME7 567 aaPredicted RBP7.43□□□□□ -1.22
SREBF2-204ENST00000462539 TCF12Q99081 682 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 PKMYT1Q99640 499 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 CCT7Q99832 543 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 TINF2Q9BSI4 451 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 TRMOQ9BU70 441 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 TRIM62Q9BVG3 475 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 FSD1LQ9BXM9 530 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 ANKRD60Q9BZ19 345 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 SEMA6AQ9H2E6 1030 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 SMOC2Q9H3U7 446 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 CATSPERBQ9H7T0 1116 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 TIMMDC1Q9NPL8 285 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 CHST12Q9NRB3 414 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 OSER1Q9NX31 292 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 DUS2Q9NX74 493 aaKnown RBP7.43□□□□□ -1.22
SREBF2-204ENST00000462539 GMPR2Q9P2T1 348 aaKnown RBP7.43□□□□□ -1.22
SREBF2-204ENST00000462539 RSL24D1Q9UHA3 163 aaKnown RBP7.43□□□□□ -1.22
SREBF2-204ENST00000462539 CIDEBQ9UHD4 219 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 TIMM13Q9Y5L4 95 aaPredicted RBP7.43□□□□□ -1.22
SREBF2-204ENST00000462539 SQORQ9Y6N5 450 aa7.43□□□□□ -1.22
SREBF2-204ENST00000462539 CHD5Q8TDI0 1954 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 C17orf102A2RUQ5 167 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 MEIS3P2A8K0S8 358 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 WASH4PA8MWX3 477 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 PLOD2O00469 737 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 UBFD1O14562 309 aaKnown RBP7.42□□□□□ -1.22
SREBF2-204ENST00000462539 DYNC1LI2O43237 492 aaPredicted RBP7.42□□□□□ -1.22
SREBF2-204ENST00000462539 HNRNPRO43390 633 aaKnown RBP7.42□□□□□ -1.22
SREBF2-204ENST00000462539 NRP2O60462 931 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 PAGE1O75459 146 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 TIPRLO75663 272 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 CSPG5O95196 566 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 PAPSS2O95340 614 aaPredicted RBP7.42□□□□□ -1.22
SREBF2-204ENST00000462539 H6PDO95479 791 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 PEX11BO96011 259 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 ALDOCP09972 364 aaKnown RBP7.42□□□□□ -1.22
SREBF2-204ENST00000462539 CDK4P11802 303 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 ODC1P11926 461 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 GPX3P22352 226 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 FDXRP22570 491 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 PCSK1P29120 753 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 HOXC8P31273 242 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 EPHX2P34913 555 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 ACADVLP49748 655 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 CDK9P50750 372 aaKnown RBP7.42□□□□□ -1.22
SREBF2-204ENST00000462539 CLCNKBP51801 687 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 SLC7A2P52569 658 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 STX1BP61266 288 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 TUBA4AP68366 448 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 IRF5Q13568 498 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 ACAP2Q15057 778 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 CYTH1Q15438 398 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 NRF1Q16656 503 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 KCTD21Q4G0X4 260 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 UNC50Q53HI1 259 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 ZNF678Q5SXM1 525 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 KANK2Q63ZY3 851 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 PPP4R4Q6NUP7 873 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 PRMT9Q6P2P2 845 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 FAM171BQ6P995 826 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 DHRS4L2Q6PKH6 230 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 LARP4Q71RC2 724 aaKnown RBP eCLIP7.42□□□□□ -1.22
SREBF2-204ENST00000462539 PLEKHH3Q7Z736 793 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 DPP9Q86TI2 863 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 TLK2Q86UE8 772 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 RETREG3Q86VR2 466 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 RNF135Q8IUD6 432 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 PACRGLQ8N7B6 248 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 RTL3Q8N8U3 475 aaKnown RBP7.42□□□□□ -1.22
SREBF2-204ENST00000462539 SNX31Q8N9S9 440 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 MFSD2AQ8NA29 543 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 OR9I1Q8NGQ6 314 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 RNF217Q8TC41 542 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 FAM110BQ8TC76 370 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 ANKRD49Q8WVL7 239 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 GAB3Q8WWW8 586 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 FATE1Q969F0 183 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 ZUFSPQ96AP4 578 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 ROPN1LQ96C74 230 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 RMND5BQ96G75 393 aaPredicted RBP7.42□□□□□ -1.22
SREBF2-204ENST00000462539 UBXN10Q96LJ8 280 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 SLC29A1Q99808 456 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 GPATCH1Q9BRR8 931 aaKnown RBP7.42□□□□□ -1.22
SREBF2-204ENST00000462539 TMEM79Q9BSE2 394 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 EFHD1Q9BUP0 239 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 TRIM15Q9C019 465 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 SIK2Q9H0K1 926 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 UPF3AQ9H1J1 476 aaKnown RBP7.42□□□□□ -1.22
SREBF2-204ENST00000462539 SLC25A51Q9H1U9 297 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 MFSD1Q9H3U5 465 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 NOL6Q9H6R4 1146 aaKnown RBP7.42□□□□□ -1.22
SREBF2-204ENST00000462539 ARNT2Q9HBZ2 717 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 TMLHEQ9NVH6 421 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 ARMC1Q9NVT9 282 aa7.42□□□□□ -1.22
SREBF2-204ENST00000462539 RBM22Q9NW64 420 aaKnown RBP eCLIP7.42□□□□□ -1.221e-7■■□□□ 12.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms