RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 PGBD5Q8N414 524 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 ZCCHC9Q8N567 271 aaKnown RBP12.17□□□□□ -0.46
RAE1-207ENST00000462438 FBF1Q8TES7 1133 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 LRRC39Q96DD0 335 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 FEM1CQ96JP0 617 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 TRIM51Q9BSJ1 452 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 SPON2Q9BUD6 331 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 PLK2Q9NYY3 685 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 GTSE1Q9NYZ3 720 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 DOLKQ9UPQ8 538 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 TCF20Q9UGU0 1960 aaKnown RBP12.17□□□□□ -0.46
RAE1-207ENST00000462438 E7ESA3 106 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 KCNK1O00180 336 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 SCAMP3O14828 347 aaKnown RBP12.17□□□□□ -0.46
RAE1-207ENST00000462438 IGSF6O95976 241 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 MMP2P08253 660 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 BMP1P13497 986 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 ECHS1P30084 290 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 HOXD12P35452 270 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 NNMTP40261 264 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 SUOXP51687 545 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 MAGOHP61326 146 aaKnown RBP12.17□□□□□ -0.46
RAE1-207ENST00000462438 SNRPD1P62314 119 aaKnown RBP12.17□□□□□ -0.46
RAE1-207ENST00000462438 CALCOCO2Q13137 446 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 NCEH1Q6PIU2 408 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 ZDHHC24Q6UX98 284 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 PID1Q7Z2X4 250 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 CCDC110Q8TBZ0 833 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 UBLCP1Q8WVY7 318 aaPredicted RBP12.17□□□□□ -0.46
RAE1-207ENST00000462438 DDX18Q9NVP1 670 aaKnown RBP12.17□□□□□ -0.46
RAE1-207ENST00000462438 SNAP91O60641 907 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 NFKB1P19838 968 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 ADCY8P40145 1251 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 SLC6A11P48066 632 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 STARD6P59095 220 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 FRG1Q14331 258 aaKnown RBP12.17□□□□□ -0.46
RAE1-207ENST00000462438 OR2AP1Q8NGE2 309 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 CEP70Q8NHQ1 597 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 ZNF641Q96N77 438 aaPredicted RBP12.17□□□□□ -0.46
RAE1-207ENST00000462438 ASB2Q96Q27 587 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 GABRG3Q99928 467 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 AASDHPPTQ9NRN7 309 aa12.17□□□□□ -0.46
RAE1-207ENST00000462438 ATXN2Q99700 1313 aaKnown RBP12.16□□□□□ -0.46
RAE1-207ENST00000462438 ANKRD36A6QL64 1941 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 EDDM13A0A1B0GTR0 161 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 LOC285095A0A1B0GVY8 99 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 SHISA7A6NL88 538 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 INSIG1O15503 277 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 DNAJC8O75937 253 aaPredicted RBP12.16□□□□□ -0.46
RAE1-207ENST00000462438 METTL18O95568 372 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 GLDCP23378 1020 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 CCND1P24385 295 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 PSMA3P25788 255 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 DGKKQ5KSL6 1271 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 IZUMO3Q5VZ72 239 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 LRRC8BQ6P9F7 803 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 EXOC3L1Q86VI1 746 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 ETNK1Q9HBU6 452 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 LRRC4CQ9HCJ2 640 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 INIPQ9NRY2 104 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 SCOCQ9UIL1 159 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 RIMKLBQ9ULI2 386 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 PPIL1Q9Y3C6 166 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 PIAS3Q9Y6X2 628 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 ZNF106Q9H2Y7 1883 aaKnown RBP12.16□□□□□ -0.46
RAE1-207ENST00000462438 HTRA2O43464 458 aaPredicted RBP12.16□□□□□ -0.46
RAE1-207ENST00000462438 MAP3K6O95382 1288 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 IFNB1P01574 187 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 PDE1CQ14123 709 aaPredicted RBP12.16□□□□□ -0.46
RAE1-207ENST00000462438 MLF2Q15773 248 aaPredicted RBP12.16□□□□□ -0.46
RAE1-207ENST00000462438 NAPEPLDQ6IQ20 393 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 EMBQ6PCB8 327 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 PRPF39Q86UA1 669 aaKnown RBP12.16□□□□□ -0.46
RAE1-207ENST00000462438 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.16□□□□□ -0.46
RAE1-207ENST00000462438 PTCD2Q8WV60 388 aaKnown RBP12.16□□□□□ -0.46
RAE1-207ENST00000462438 ZFAND2BQ8WV99 257 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 SHDQ96IW2 340 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 NELL2Q99435 816 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 MLPHQ9BV36 600 aaPredicted RBP12.16□□□□□ -0.46
RAE1-207ENST00000462438 VCXQ9H320 206 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 CASS4Q9NQ75 786 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 RAB6BQ9NRW1 208 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 DKK3Q9UBP4 350 aa12.16□□□□□ -0.46
RAE1-207ENST00000462438 FZD6O60353 706 aa12.15□□□□□ -0.46
RAE1-207ENST00000462438 PSMB4P28070 264 aa12.15□□□□□ -0.46
RAE1-207ENST00000462438 KIR2DL1P43626 348 aaPredicted RBP12.15□□□□□ -0.46
RAE1-207ENST00000462438 HNRNPA1L2Q32P51 320 aaKnown RBP12.15□□□□□ -0.46
RAE1-207ENST00000462438 CARD16Q5EG05 197 aa12.15□□□□□ -0.46
RAE1-207ENST00000462438 TMEM214Q6NUQ4 689 aaKnown RBP12.15□□□□□ -0.46
RAE1-207ENST00000462438 PEX13Q92968 403 aa12.15□□□□□ -0.46
RAE1-207ENST00000462438 CAVIN3Q969G5 261 aa12.15□□□□□ -0.46
RAE1-207ENST00000462438 VOPP1Q96AW1 172 aa12.15□□□□□ -0.46
RAE1-207ENST00000462438 ECHDC3Q96DC8 303 aa12.15□□□□□ -0.46
RAE1-207ENST00000462438 TRIB3Q96RU7 358 aa12.15□□□□□ -0.46
RAE1-207ENST00000462438 RANBP9Q96S59 729 aa12.15□□□□□ -0.46
RAE1-207ENST00000462438 MRM3Q9HC36 420 aaKnown RBP12.15□□□□□ -0.46
RAE1-207ENST00000462438 NT5MQ9NPB1 228 aa12.15□□□□□ -0.46
RAE1-207ENST00000462438 MTRF1LQ9UGC7 380 aaKnown RBP12.15□□□□□ -0.46
RAE1-207ENST00000462438 TSC22D4Q9Y3Q8 395 aa12.15□□□□□ -0.46
RAE1-207ENST00000462438 CDH23Q9H251 3354 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms