RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 YTHDF3Q7Z739 585 aaKnown RBP3.27□□□□□ -1.89
VCL-203ENST00000461383 PRPF39Q86UA1 669 aaKnown RBP3.27□□□□□ -1.89
VCL-203ENST00000461383 TMTC2Q8N394 836 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 ZBTB2Q8N680 514 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 CCDC191Q8NCU4 936 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 MCPH1Q8NEM0 835 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 APPL2Q8NEU8 664 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 HUS1BQ8NHY5 278 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 SLC35F5Q8WV83 523 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 ELMOD3Q96FG2 381 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 CNDP2Q96KP4 475 aaKnown RBP3.27□□□□□ -1.89
VCL-203ENST00000461383 GFM1Q96RP9 751 aaKnown RBP3.27□□□□□ -1.89
VCL-203ENST00000461383 AGAP2Q99490 1192 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 QTRT1Q9BXR0 403 aaKnown RBP3.27□□□□□ -1.89
VCL-203ENST00000461383 TXLNGYQ9BZA5 131 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 SEMA4CQ9C0C4 833 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 TKTL2Q9H0I9 626 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 TASP1Q9H6P5 420 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 MVB12BQ9H7P6 319 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 PDE7BQ9NP56 450 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 NRIP3Q9NQ35 241 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 SLC35C2Q9NQQ7 365 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 ANKRD10Q9NXR5 420 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 CISD1Q9NZ45 108 aaKnown RBP3.27□□□□□ -1.89
VCL-203ENST00000461383 OGFRQ9NZT2 677 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 ABI3Q9P2A4 366 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 NFKBIL1Q9UBC1 381 aaPredicted RBP3.27□□□□□ -1.89
VCL-203ENST00000461383 CFDP1Q9UEE9 299 aaPredicted RBP3.27□□□□□ -1.89
VCL-203ENST00000461383 FBXL17Q9UF56 701 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 ERVK-11Q9UQG0 969 aa3.27□□□□□ -1.89
VCL-203ENST00000461383 PASKQ96RG2 1323 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 A6NNC1 897 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 TAF4O00268 1085 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 CHL1O00533 1208 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 ADAM10O14672 748 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 HCRTR2O43614 444 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 ERAL1O75616 437 aaKnown RBP3.26□□□□□ -1.89
VCL-203ENST00000461383 TPPPO94811 219 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 OR2C1O95371 312 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 CLDN7O95471 211 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 MMP2P08253 660 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 GABRB1P18505 474 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 SHMT1P34896 483 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 MATR3P43243 847 aaKnown RBP eCLIP3.26□□□□□ -1.89
VCL-203ENST00000461383 PPP3CCP48454 512 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 PROK1P58294 105 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 NEDD9Q14511 834 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 LPIN1Q14693 890 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 RASA2Q15283 850 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 INPP5JQ15735 1006 aaPredicted RBP3.26□□□□□ -1.89
VCL-203ENST00000461383 SOWAHAQ2M3V2 549 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 USP41Q3LFD5 358 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 CXorf66Q5JRM2 361 aaPredicted RBP3.26□□□□□ -1.89
VCL-203ENST00000461383 EPHA10Q5JZY3 1008 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 KIAA0930Q6ICG6 404 aaPredicted RBP3.26□□□□□ -1.89
VCL-203ENST00000461383 TMEM71Q6P5X7 295 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 KRT74Q7RTS7 529 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 TRAPPC11Q7Z392 1133 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 NOXA1Q86UR1 476 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 HAPLN4Q86UW8 402 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 ADGRG3Q86Y34 549 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 SFTPA2Q8IWL1 248 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 SLC35F3Q8IY50 421 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 AVL9Q8NBF6 648 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 KCTD6Q8NC69 237 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 MCUQ8NE86 351 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 BEST2Q8NFU1 509 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 TMEM174Q8WUU8 243 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 NSMCE1Q8WV22 266 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 TMEM18Q96B42 140 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 SLITRK1Q96PX8 696 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 BAG1Q99933 345 aaPredicted RBP3.26□□□□□ -1.89
VCL-203ENST00000461383 APOL6Q9BWW8 343 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 NPFFR1Q9GZQ6 430 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 R3HDMLQ9H3Y0 253 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 PLK3Q9H4B4 646 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 GPR108Q9NPR9 543 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 ADARB2Q9NS39 739 aaKnown RBP3.26□□□□□ -1.89
VCL-203ENST00000461383 CYSLTR2Q9NS75 346 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 DECR2Q9NUI1 292 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 GIMAP4Q9NUV9 329 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 TAB2Q9NYJ8 693 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 MSRB1Q9NZV6 116 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 MORF4L1Q9UBU8 362 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 PPIEQ9UNP9 301 aaKnown RBP3.26□□□□□ -1.89
VCL-203ENST00000461383 COG5Q9UP83 839 aa3.26□□□□□ -1.89
VCL-203ENST00000461383 MAGED1Q9Y5V3 778 aaPredicted RBP3.26□□□□□ -1.89
VCL-203ENST00000461383 A0A0U1RQF3 1178 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 A0A1W2PPC1 479 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 LRRC72A6NJI9 287 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 KDM4EB2RXH2 506 aaPredicted RBP3.25□□□□□ -1.89
VCL-203ENST00000461383 DKC1O60832 514 aaKnown RBP eCLIP3.25□□□□□ -1.89
VCL-203ENST00000461383 ENTPD3O75355 529 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 BCAR3O75815 825 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 NDUFB4O95168 129 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 NR2F1P10589 423 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 CHRNB2P17787 502 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 CD58P19256 250 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 AGAP20933 346 aa3.25□□□□□ -1.89
VCL-203ENST00000461383 MYF6P23409 242 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms