RNA–Protein interactions for RNA: ENST00000460639.2

ATRX-204, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-204ENST00000460639 TRIM31Q9BZY9 425 aa4.7□□□□□ -1.66
ATRX-204ENST00000460639 KRT23Q9C075 422 aa4.7□□□□□ -1.66
ATRX-204ENST00000460639 TTC12Q9H892 705 aaPredicted RBP4.7□□□□□ -1.66
ATRX-204ENST00000460639 USP29Q9HBJ7 922 aa4.7□□□□□ -1.66
ATRX-204ENST00000460639 FBRSL1Q9HCM7 1045 aaKnown RBP4.7□□□□□ -1.66
ATRX-204ENST00000460639 OLAHQ9NV23 265 aa4.7□□□□□ -1.66
ATRX-204ENST00000460639 MTMR4Q9NYA4 1195 aa4.7□□□□□ -1.66
ATRX-204ENST00000460639 LRIT1Q9P2V4 623 aa4.7□□□□□ -1.66
ATRX-204ENST00000460639 FAM153AQ9UHL3 310 aa4.7□□□□□ -1.66
ATRX-204ENST00000460639 BAG5Q9UL15 447 aa4.7□□□□□ -1.66
ATRX-204ENST00000460639 SLC12A4Q9UP95 1085 aa4.7□□□□□ -1.66
ATRX-204ENST00000460639 TRIM17Q9Y577 477 aa4.7□□□□□ -1.66
ATRX-204ENST00000460639 SNX14Q9Y5W7 946 aa4.7□□□□□ -1.66
ATRX-204ENST00000460639 C16orf96A6NNT2 1141 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 KCNJ18B7U540 433 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 CACNB4O00305 520 aaPredicted RBP4.69□□□□□ -1.66
ATRX-204ENST00000460639 PSMA7O14818 248 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 WDR46O15213 610 aaKnown RBP4.69□□□□□ -1.66
ATRX-204ENST00000460639 TACC1O75410 805 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 NME6O75414 186 aaPredicted RBP4.69□□□□□ -1.66
ATRX-204ENST00000460639 PENKP01210 267 aaPredicted RBP4.69□□□□□ -1.66
ATRX-204ENST00000460639 PDHBP11177 359 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 IL10P22301 178 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 YY1P25490 414 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 CD27P26842 260 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 PPIFP30405 207 aaKnown RBP4.69□□□□□ -1.66
ATRX-204ENST00000460639 ACVRL1P37023 503 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 MPLP40238 635 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 ZNF81P51508 661 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 INHBEP58166 350 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 PRAMEP78395 509 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 CCNA1P78396 465 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 ITIH3Q06033 890 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 NPRL3Q12980 569 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 CSTF3Q12996 717 aaKnown RBP4.69□□□□□ -1.66
ATRX-204ENST00000460639 PPIGQ13427 754 aaKnown RBP eCLIP4.69□□□□□ -1.66
ATRX-204ENST00000460639 RCN2Q14257 317 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 KCNJ12Q14500 433 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 TXNRD1Q16881 649 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 MYLK3Q32MK0 819 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 CST9LP1Q5W188 147 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 SLC25A24Q6NUK1 477 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 TMEM81Q6P7N7 255 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 CLEC9AQ6UXN8 241 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 C15orf39Q6ZRI6 1047 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 LPCAT2Q7L5N7 544 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 LDLRAD3Q86YD5 345 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 TC2NQ8N9U0 490 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 ACTRT2Q8TDY3 377 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 RNF139Q8WU17 664 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 PTPMT1Q8WUK0 201 aaPredicted RBP4.69□□□□□ -1.66
ATRX-204ENST00000460639 SLC5A11Q8WWX8 675 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 GLG1Q92896 1179 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 ZKSCAN4Q969J2 545 aaPredicted RBP4.69□□□□□ -1.66
ATRX-204ENST00000460639 VPS50Q96JG6 964 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 CEP295NLQ96MC4 621 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 GAD1Q99259 594 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 CD180Q99467 661 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 SLC25A23Q9BV35 468 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 ACPTQ9BZG2 426 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 PDZD7Q9H5P4 517 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 EPHX3Q9H6B9 360 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 SETD4Q9NVD3 440 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 CNOT8Q9UFF9 292 aaKnown RBP4.69□□□□□ -1.66
ATRX-204ENST00000460639 ST3GAL5Q9UNP4 418 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 SMC3Q9UQE7 1217 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 OSGIN2Q9Y236 505 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 C2CD2Q9Y426 696 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 CLCA3PQ9Y6N3 262 aa4.69□□□□□ -1.66
ATRX-204ENST00000460639 POLR2AP24928 1970 aaKnown RBP4.69□□□□□ -1.66
ATRX-204ENST00000460639 ZNF335Q9H4Z2 1342 aaPredicted RBP4.69□□□□□ -1.66
ATRX-204ENST00000460639 DHX29Q7Z478 1369 aaKnown RBP4.68□□□□□ -1.66
ATRX-204ENST00000460639 TEX13CA0A0J9YWL9 993 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 ERICH4A6NGS2 130 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 SNAP23O00161 211 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 CLIC2O15247 247 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 USP12O75317 370 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 AKAP3O75969 853 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 REC8O95072 547 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 TRIM16O95361 564 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 SLPIP03973 132 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 ABCB1P08183 1280 aaPredicted RBP4.68□□□□□ -1.66
ATRX-204ENST00000460639 NR2F6P10588 404 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 LIPAP38571 399 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 CDKN1AP38936 164 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 FOLR3P41439 243 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 AVPR1BP47901 424 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 TRPC1P48995 793 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 GATMP50440 423 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 PGDP52209 483 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 CDK18Q07002 472 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 BMPR2Q13873 1038 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 RABL6Q3YEC7 729 aaPredicted RBP4.68□□□□□ -1.66
ATRX-204ENST00000460639 HSP90B2PQ58FF3 399 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 C12orf60Q5U649 245 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 CES4AQ5XG92 561 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 SFRP4Q6FHJ7 346 aaPredicted RBP4.68□□□□□ -1.66
ATRX-204ENST00000460639 PLEKHM3Q6ZWE6 761 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 SLC46A3Q7Z3Q1 461 aa4.68□□□□□ -1.66
ATRX-204ENST00000460639 PEG10Q86TG7 708 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms