RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 CHKBQ9Y259 395 aa22.59■■□□□ 1.21
C9orf3-209ENST00000460573 ANKRD36A6QL64 1941 aa22.59■■□□□ 1.21
C9orf3-209ENST00000460573 GOLGA6CA6NDK9 693 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 GOLGA6BA6NDN3 693 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 KIF2AO00139 706 aaPredicted RBP22.58■■□□□ 1.21
C9orf3-209ENST00000460573 LATO43561 262 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 PRLP01236 227 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 EPOP01588 193 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 IGHV4-34P06331 123 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 PDHA1P08559 390 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 GOLGA6DP0CG33 693 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 CYP2A6P11509 494 aaPredicted RBP22.58■■□□□ 1.21
C9orf3-209ENST00000460573 PAFAH1B1P43034 410 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 TNNT3P45378 269 aaPredicted RBP22.58■■□□□ 1.21
C9orf3-209ENST00000460573 GDF10P55107 478 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 CDK18Q07002 472 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 CYP1B1Q16678 543 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 PARP6Q2NL67 630 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 CCDC70Q6NSX1 233 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 C4orf22Q6V702 233 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 USP45Q70EL2 814 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 CREG2Q8IUH2 290 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 ATL2Q8NHH9 583 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 CXorf40AQ8TE69 158 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 IFT43Q96FT9 208 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 SCRN2Q96FV2 425 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 NUSAP1Q9BXS6 441 aaKnown RBP22.58■■□□□ 1.21
C9orf3-209ENST00000460573 RXFP3Q9NSD7 469 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 GOLGA6AQ9NYA3 693 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 FEZ2Q9UHY8 353 aaPredicted RBP22.58■■□□□ 1.21
C9orf3-209ENST00000460573 CEP192Q8TEP8 1941 aa22.58■■□□□ 1.21
C9orf3-209ENST00000460573 CACNA1AO00555 2505 aa22.58■■□□□ 1.2
C9orf3-209ENST00000460573 A0A1W2PQU0 124 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 FANCGO15287 622 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 SPINT1O43278 529 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 MT-CYBP00156 380 aaPredicted RBP22.57■■□□□ 1.2
C9orf3-209ENST00000460573 CD27P26842 260 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 MMP12P39900 470 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 GRIA4P48058 902 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 FAM193AP78312 1265 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 TMEM259Q4ZIN3 620 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 SETMARQ53H47 684 aaPredicted RBP22.57■■□□□ 1.2
C9orf3-209ENST00000460573 FAM182AQ5T1J6 154 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 DPPA4Q7L190 304 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 RABEPKQ7Z6M1 372 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 SYT12Q8IV01 421 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 RGL4Q8IZJ4 473 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 CCDC89Q8N998 374 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 ASB12Q8WXK4 309 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 MAGOHBQ96A72 148 aaKnown RBP22.57■■□□□ 1.2
C9orf3-209ENST00000460573 LRRC45Q96CN5 670 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 C16orf45Q96MC5 204 aaPredicted RBP22.57■■□□□ 1.2
C9orf3-209ENST00000460573 MCCC1Q96RQ3 725 aaPredicted RBP22.57■■□□□ 1.2
C9orf3-209ENST00000460573 AP1M1Q9BXS5 423 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 SUSD2Q9UGT4 822 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 DMTF1Q9Y222 760 aa22.57■■□□□ 1.2
C9orf3-209ENST00000460573 A0A0J9YYE9 177 aa22.56■■□□□ 1.2
C9orf3-209ENST00000460573 A0A1W2PPC4 97 aa22.56■■□□□ 1.2
C9orf3-209ENST00000460573 PMPCBO75439 489 aa22.56■■□□□ 1.2
C9orf3-209ENST00000460573 IFNB1P01574 187 aa22.56■■□□□ 1.2
C9orf3-209ENST00000460573 TRBC1P01850 177 aa22.56■■□□□ 1.2
C9orf3-209ENST00000460573 PSMB4P28070 264 aa22.56■■□□□ 1.2
C9orf3-209ENST00000460573 PPP2CBP62714 309 aa22.56■■□□□ 1.2
C9orf3-209ENST00000460573 PPP2CAP67775 309 aa22.56■■□□□ 1.2
C9orf3-209ENST00000460573 LRRC73Q5JTD7 316 aa22.56■■□□□ 1.2
C9orf3-209ENST00000460573 PEAR1Q5VY43 1037 aaPredicted RBP22.56■■□□□ 1.2
C9orf3-209ENST00000460573 KDELC1Q6UW63 502 aa22.56■■□□□ 1.2
C9orf3-209ENST00000460573 GSTA5Q7RTV2 222 aa22.56■■□□□ 1.2
C9orf3-209ENST00000460573 SNX19Q92543 992 aa22.56■■□□□ 1.2
C9orf3-209ENST00000460573 OXNAD1Q96HP4 312 aaPredicted RBP22.56■■□□□ 1.2
C9orf3-209ENST00000460573 TRIB3Q96RU7 358 aa22.56■■□□□ 1.2
C9orf3-209ENST00000460573 UBP1Q9NZI7 540 aa22.56■■□□□ 1.2
C9orf3-209ENST00000460573 PAK5Q9P286 719 aa22.56■■□□□ 1.2
C9orf3-209ENST00000460573 PILRBQ9UKJ0 227 aa22.56■■□□□ 1.2
C9orf3-209ENST00000460573 ZFR2Q9UPR6 939 aaKnown RBP22.56■■□□□ 1.2
C9orf3-209ENST00000460573 ITM2BQ9Y287 266 aa22.56■■□□□ 1.2
C9orf3-209ENST00000460573 NUMA1Q14980 2115 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 LOC285095A0A1B0GVY8 99 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 ANKRD66B4E2M5 251 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 PSMD3O43242 534 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 NDST3O95803 873 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 GNSP15586 552 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 ITPKAP23677 461 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 FNTAP49354 379 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 ATXN3P54252 364 aaPredicted RBP22.55■■□□□ 1.2
C9orf3-209ENST00000460573 WNT3AP56704 352 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 PCSK7Q16549 785 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 ZNF284Q2VY69 593 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 TRIM61Q5EBN2 209 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 LPCAT1Q8NF37 534 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 CEP76Q8TAP6 659 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 CAPZA3Q96KX2 299 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 SRPK1Q96SB4 655 aaKnown RBP22.55■■□□□ 1.2
C9orf3-209ENST00000460573 MLPHQ9BV36 600 aaPredicted RBP22.55■■□□□ 1.2
C9orf3-209ENST00000460573 C1QTNF2Q9BXJ5 285 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 SLC17A9Q9BYT1 436 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 TMEM9BQ9NQ34 198 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 SMARCAL1Q9NZC9 954 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 B4GALT6Q9UBX8 382 aa22.55■■□□□ 1.2
C9orf3-209ENST00000460573 EIF2B4Q9UI10 523 aaKnown RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms