RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 LGALS16A8MUM7 142 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 PTGES3LE9PB15 166 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 H0Y8G0 127 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 ANGPT2O15123 496 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 B3GALT2O43825 422 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 RAD17O75943 681 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 UBXN7O94888 489 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 PRAMEF12O95522 483 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 IL1AP01583 271 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 TPOP07202 933 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 GJB1P08034 283 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 TBXAS1P24557 533 aaPredicted RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 RRM2P31350 389 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 GUCY1A2P33402 732 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 DNM2P50570 870 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 RPP30P78346 268 aaKnown RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 UBE3AQ05086 875 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 GOLGA8FQ08AF8 430 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 ZNF543Q08ER8 600 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 GOLGA8DPQ0D2H9 430 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 DBPQ10586 325 aaPredicted RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 GPS1Q13098 491 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 CALCOCO2Q13137 446 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 PPIL2Q13356 520 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 PMS2P11Q13670 270 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 THOC5Q13769 683 aaKnown RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 DDX39BQ13838 428 aaKnown RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 PDK1Q15118 436 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 KRT31Q15323 416 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 CNN3Q15417 329 aaKnown RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 CHRNA6Q15825 494 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 RNF151Q2KHN1 245 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 MPEG1Q2M385 716 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 DUSP28Q4G0W2 176 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 MIIPQ5JXC2 388 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 KLHDC7AQ5VTJ3 777 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 CACHD1Q5VU97 1274 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 BTBD8Q5XKL5 378 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 AFMIDQ63HM1 303 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 ANKRD40Q6AI12 368 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 METTL2BQ6P1Q9 378 aaKnown RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 CYB5D1Q6P9G0 228 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 BLOC1S2Q6QNY1 142 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 METAP1DQ6UB28 335 aaPredicted RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 DPP8Q6V1X1 898 aaPredicted RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 SLC36A4Q6YBV0 504 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 TPGS1Q6ZTW0 290 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 USP50Q70EL3 339 aaPredicted RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 FGD2Q7Z6J4 655 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 CPLX4Q7Z7G2 160 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 GPR149Q86SP6 731 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 SLC51BQ86UW2 128 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 FJX1Q86VR8 437 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 LRRC6Q86X45 466 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 CAMK1DQ8IU85 385 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 ZDHHC17Q8IUH5 632 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 LIX1LQ8IVB5 337 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 MAPKAPK5Q8IW41 473 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 DNAJC10Q8IXB1 793 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 C17orf53Q8N3J3 647 aaPredicted RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 IQUBQ8NA54 791 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 ATAD1Q8NBU5 361 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 BBS1Q8NFJ9 593 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 OR52M1Q8NGK5 317 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 FIBINQ8TAL6 211 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 POC1BQ8TC44 478 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 SH3RF2Q8TEC5 729 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 EDAQ92838 391 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 PTERQ96BW5 349 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 IQCDQ96DY2 449 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 C1GALT1C1Q96EU7 318 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 TMA16Q96EY4 203 aaKnown RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 ERO1AQ96HE7 468 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 MED30Q96HR3 178 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 ABHD8Q96I13 439 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 WNK4Q96J92 1243 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 FAM20AQ96MK3 541 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 RPRD1AQ96P16 312 aaPredicted RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 RAB3IPQ96QF0 476 aaPredicted RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 CINPQ9BW66 212 aaPredicted RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 ZNF518BQ9C0D4 1074 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 RIBC2Q9H4K1 309 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 LZTFL1Q9NQ48 299 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 SNX15Q9NRS6 342 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 RIC8BQ9NVN3 520 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 DDX43Q9NXZ2 648 aaKnown RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 STK32BQ9NY57 414 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 C5AR2Q9P296 337 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 UXTQ9UBK9 157 aaPredicted RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 SLC7A8Q9UHI5 535 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 SERPINB13Q9UIV8 391 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 CHKBQ9Y259 395 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 USP15Q9Y4E8 981 aaPredicted RBP5.49□□□□□ -1.53
VPS41-209ENST00000457055 CCL27Q9Y4X3 112 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 POMT1Q9Y6A1 747 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 FAM169AQ9Y6X4 670 aa5.49□□□□□ -1.53
VPS41-209ENST00000457055 TTC21AQ8NDW8 1320 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 EEA1Q15075 1411 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 CEP162Q5TB80 1403 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 E9PCH4 1651 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms