RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	EEF1G	P26641	437 aa	Known RBP	13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	ACVRL1	P37023	503 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	RAD51	Q06609	339 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	ELP6	Q0PNE2	266 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	KLRB1	Q12918	225 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	MTM1	Q13496	603 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	TRA2A	Q13595	282 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	SLC25A52	Q3SY17	297 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	AMZ1	Q400G9	498 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	TMEM52B	Q4KMG9	183 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	TCP11X2	Q5H9J9	407 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	CDKAL1	Q5VV42	579 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	KCTD16	Q68DU8	428 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	SPECC1L	Q69YQ0	1117 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	NYAP1	Q6ZVC0	841 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	ZNF438	Q7Z4V0	828 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	IRF2BP1	Q8IU81	584 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	SFTPA2	Q8IWL1	248 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	AGBL5	Q8NDL9	886 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	RCBTB1	Q8NDN9	531 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	KIAA1524	Q8TCG1	905 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	APOBEC4	Q8WW27	367 aa	Known RBP	13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	OR1E3	Q8WZA6	343 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	GDAP1L1	Q96MZ0	367 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	NUDT22	Q9BRQ3	303 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	ASPSCR1	Q9BZE9	553 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	DPEP2	Q9H4A9	486 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	HPCAL4	Q9UM19	191 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	B3GALT1	Q9Y5Z6	326 aa		13.26	□□□□□ -0.29
SNHG17-208	ENST00000456953	IGHV5-10-1	A0A0J9YXX1	117 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	PRR19	A6NJB7	356 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	PES1	O00541	588 aa	Known RBP	13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	NKX2-8	O15522	239 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	MTSS1	O43312	755 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	RAD1	O60671	282 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	PRKCSH	P14314	528 aa	Predicted RBP	13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	XPA	P23025	273 aa	Predicted RBP	13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	OR1D5	P58170	312 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	RNASE9	P60153	205 aa	Known RBP	13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	CDC20	Q12834	499 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	SEPT6	Q14141	434 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	NR1D2	Q14995	579 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	AGER	Q15109	404 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	ARHGAP44	Q17R89	818 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	PTPN20	Q4JDL3	420 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	GAS2L3	Q86XJ1	694 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	OR56A4	Q8NGH8	313 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	ART4	Q93070	314 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	FAM81B	Q96LP2	452 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	CCDC74B	Q96LY2	380 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	TBCB	Q99426	244 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	RBSN	Q9H1K0	784 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	RETREG1	Q9H6L5	497 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	FGF22	Q9HCT0	170 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	COQ6	Q9Y2Z9	468 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	MFHAS1	Q9Y4C4	1052 aa		13.25	□□□□□ -0.29
SNHG17-208	ENST00000456953	FBN2	P35556	2912 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	TMEM202	A6NGA9	273 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	RHPN2P1	A8MT19	583 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	TNFRSF10C	O14798	259 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	AGFG2	O95081	481 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	SERPINC1	P01008	464 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	PCCB	P05166	539 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	PRKAR1A	P10644	381 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	KEL	P23276	732 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	ALDH4A1	P30038	563 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	USP8	P40818	1118 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	MAPKAPK2	P49137	400 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	LIMK2	P53671	638 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	MARS	P56192	900 aa	Known RBP	13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	KIAA1024L	P59773	190 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	MAN2A1	Q16706	1144 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	C17orf82	Q86X59	251 aa	Predicted RBP	13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	TRIM59	Q8IWR1	403 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	TUBGCP2	Q9BSJ2	902 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	EFHD1	Q9BUP0	239 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	TTYH3	Q9C0H2	523 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	TMEM168	Q9H0V1	697 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	MAGEH1	Q9H213	219 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	SLC39A1	Q9NY26	324 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	TAB2	Q9NYJ8	693 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	PILRA	Q9UKJ1	303 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	DOPEY1	Q5JWR5	2465 aa		13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.24	□□□□□ -0.29
SNHG17-208	ENST00000456953	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953		B4E171	279 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	CACNB4	O00305	520 aa	Predicted RBP	13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	TMCC1	O94876	653 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	IGSF6	O95976	241 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	KRT7	P08729	469 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	ATP1A3	P13637	1013 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	CD1C	P29017	333 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	CSTF2	P33240	577 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	SCNN1A	P37088	669 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	TSPAN7	P41732	249 aa		13.23	□□□□□ -0.29
SNHG17-208	ENST00000456953	GPR3	P46089	330 aa		13.23	□□□□□ -0.29

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