RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 USP36Q9P275 1121 aaKnown RBP14.2□□□□□ -0.14
LINC00887-204ENST00000456816 SHOC2Q9UQ13 582 aa14.2□□□□□ -0.14
LINC00887-204ENST00000456816 INVSQ9Y283 1065 aa14.2□□□□□ -0.14
LINC00887-204ENST00000456816 ITM2BQ9Y287 266 aa14.2□□□□□ -0.14
LINC00887-204ENST00000456816 TBC1D3DA0A087WVF3 549 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 TBC1D3IA0A087WXS9 549 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 TBC1D3EA0A087X179 549 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 TBC1D3KA0A087X1G2 549 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 A0A0J9YYE9 177 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 TBC1D3FA6NER0 549 aaPredicted RBP14.19□□□□□ -0.14
LINC00887-204ENST00000456816 LRRC72A6NJI9 287 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 TBC1D3LB9A6J9 549 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 SMAPO00193 183 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 MAP3K13O43283 966 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 NDUFS2O75306 463 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 TMEM63AO94886 807 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 TRBC1P01850 177 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 TBC1D3HP0C7X1 549 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 TPH1P17752 444 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 IVDP26440 423 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 VIPR1P32241 457 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 HNF1BP35680 557 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 GRIA1P42261 906 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 MAGEA6P43360 314 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 PLTPP55058 493 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 SESN2P58004 480 aaPredicted RBP14.19□□□□□ -0.14
LINC00887-204ENST00000456816 DMWDQ09019 674 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 HLTFQ14527 1009 aaKnown RBP eCLIP14.19□□□□□ -0.14
LINC00887-204ENST00000456816 DENND2CQ68D51 928 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 TBC1D3GQ6DHY5 549 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 TBC1D3CQ6IPX1 549 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 RANBP10Q6VN20 620 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 KLHDC8BQ8IXV7 354 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 TBC1D3Q8IZP1 549 aaPredicted RBP14.19□□□□□ -0.14
LINC00887-204ENST00000456816 NAT8LQ8N9F0 302 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 UBXN4Q92575 508 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 VOPP1Q96AW1 172 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 SRPK1Q96SB4 655 aaKnown RBP14.19□□□□□ -0.14
LINC00887-204ENST00000456816 WRAP53Q9BUR4 548 aaKnown RBP14.19□□□□□ -0.14
LINC00887-204ENST00000456816 GPR63Q9BZJ6 419 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 SGK2Q9HBY8 427 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 XAB2Q9HCS7 855 aaKnown RBP14.19□□□□□ -0.14
LINC00887-204ENST00000456816 B4GALT6Q9UBX8 382 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 DMGDHQ9UI17 866 aaKnown RBP14.19□□□□□ -0.14
LINC00887-204ENST00000456816 FBXO4Q9UKT5 387 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 TRIOO75962 3097 aa14.19□□□□□ -0.14
LINC00887-204ENST00000456816 C1orf232A0A0U1RR37 186 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 NPIPB15A6NHN6 443 aaPredicted RBP14.18□□□□□ -0.14
LINC00887-204ENST00000456816 TSPAN6O43657 245 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 PLRG1O43660 514 aaKnown RBP14.18□□□□□ -0.14
LINC00887-204ENST00000456816 SEMA4FO95754 770 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 ELFN1P0C7U0 828 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 CD6P30203 668 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 HOXA6P31267 233 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 MMP12P39900 470 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 ADPRHP54922 357 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 ARL4CP56559 192 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 CAV1Q03135 178 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 MTM1Q13496 603 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 POU6F1Q14863 301 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 ANGPT1Q15389 498 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 DNAJC21Q5F1R6 531 aaKnown RBP14.18□□□□□ -0.14
LINC00887-204ENST00000456816 HIBCHQ6NVY1 386 aaPredicted RBP14.18□□□□□ -0.14
LINC00887-204ENST00000456816 CASC4Q6P4E1 433 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 LRRC8BQ6P9F7 803 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 DPPA4Q7L190 304 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 GLT6D1Q7Z4J2 308 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 LONP2Q86WA8 852 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 IFT20Q8IY31 132 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 MCUQ8NE86 351 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 SPOCK2Q92563 424 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 SCRN2Q96FV2 425 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 TOE1Q96GM8 510 aaKnown RBP14.18□□□□□ -0.14
LINC00887-204ENST00000456816 SMIM14Q96QK8 99 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 CASS4Q9NQ75 786 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 BFARQ9NZS9 450 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 HACD3Q9P035 362 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.18□□□□□ -0.14
LINC00887-204ENST00000456816 GGT7Q9UJ14 662 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 ZNF711Q9Y462 761 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 FADS3Q9Y5Q0 445 aa14.18□□□□□ -0.14
LINC00887-204ENST00000456816 V9GYY5 206 aaPredicted RBP14.18□□□□□ -0.14
LINC00887-204ENST00000456816 IGHV1OR15-9A0A0B4J2B8 117 aa14.17□□□□□ -0.14
LINC00887-204ENST00000456816 AP1G1O43747 822 aa14.17□□□□□ -0.14
LINC00887-204ENST00000456816 ACSL1P33121 698 aa14.17□□□□□ -0.14
LINC00887-204ENST00000456816 PTPRRQ15256 657 aa14.17□□□□□ -0.14
LINC00887-204ENST00000456816 HIF1AQ16665 826 aa14.17□□□□□ -0.14
LINC00887-204ENST00000456816 DENND5AQ6IQ26 1287 aa14.17□□□□□ -0.14
LINC00887-204ENST00000456816 LYSMD3Q7Z3D4 306 aa14.17□□□□□ -0.14
LINC00887-204ENST00000456816 TSPAN33Q86UF1 283 aa14.17□□□□□ -0.14
LINC00887-204ENST00000456816 WDR5BQ86VZ2 330 aa14.17□□□□□ -0.14
LINC00887-204ENST00000456816 PDIK1LQ8N165 341 aa14.17□□□□□ -0.14
LINC00887-204ENST00000456816 FAM160A2Q8N612 972 aaPredicted RBP14.17□□□□□ -0.14
LINC00887-204ENST00000456816 PPHLN1Q8NEY8 458 aaKnown RBP14.17□□□□□ -0.14
LINC00887-204ENST00000456816 OR2T34Q8NGX1 318 aa14.17□□□□□ -0.14
LINC00887-204ENST00000456816 SERPINB12Q96P63 405 aa14.17□□□□□ -0.14
LINC00887-204ENST00000456816 MCCC1Q96RQ3 725 aaPredicted RBP14.17□□□□□ -0.14
LINC00887-204ENST00000456816 GPR174Q9BXC1 333 aa14.17□□□□□ -0.14
LINC00887-204ENST00000456816 FRMD8Q9BZ67 464 aaPredicted RBP14.17□□□□□ -0.14
LINC00887-204ENST00000456816 TRABDQ9H4I3 376 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms