RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 LIPCP11150 499 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 EEF1GP26641 437 aaKnown RBP12.47□□□□□ -0.41
TRA2B-206ENST00000456380 ETV5P41161 510 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 MTM1Q13496 603 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 GRM3Q14832 879 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 CERCAMQ5T4B2 595 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 ERAP2Q6P179 960 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 BRAT1Q6PJG6 821 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 TRIM72Q6ZMU5 477 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 C3orf20Q8ND61 904 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 FAM46DQ8NEK8 389 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 OR56A4Q8NGH8 313 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 ATL2Q8NHH9 583 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 FUBP1Q96AE4 644 aaKnown RBP12.47□□□□□ -0.41
TRA2B-206ENST00000456380 CLSTN2Q9H4D0 955 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 LRRC19Q9H756 370 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 CATSPERBQ9H7T0 1116 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 FGF22Q9HCT0 170 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 NLRC4Q9NPP4 1024 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 MRPL40Q9NQ50 206 aaKnown RBP12.47□□□□□ -0.41
TRA2B-206ENST00000456380 FAM207AQ9NSI2 230 aaPredicted RBP12.47□□□□□ -0.41
TRA2B-206ENST00000456380 ATP8A1Q9Y2Q0 1164 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 RNF215Q9Y6U7 377 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 LRRK1Q38SD2 2015 aa12.47□□□□□ -0.41
TRA2B-206ENST00000456380 PRAMEF33A0A0G2JMD5 474 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 TCRBV5S1A1TA0A578 114 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 SIGLEC16A6NMB1 481 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 ARHGAP6O43182 974 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 PRAMEF10O60809 474 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 ITGB2P05107 769 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 PNLIPP16233 465 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 ITGB6P18564 788 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 NSFP46459 744 aaKnown RBP12.46□□□□□ -0.41
TRA2B-206ENST00000456380 RGRP47804 291 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 ZNF143P52747 638 aaPredicted RBP12.46□□□□□ -0.41
TRA2B-206ENST00000456380 HLTFQ14527 1009 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRA2B-206ENST00000456380 CLEC16AQ2KHT3 1053 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 XKR5Q6UX68 686 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 SPRED1Q7Z699 444 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 TAF8Q7Z7C8 310 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 ZFAND4Q86XD8 727 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 PHF13Q86YI8 300 aaPredicted RBP12.46□□□□□ -0.41
TRA2B-206ENST00000456380 SLITRK4Q8IW52 837 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 TRIM4Q9C037 500 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 FAM117AQ9C073 453 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 TMEM168Q9H0V1 697 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 VPS16Q9H269 839 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 STARD5Q9NSY2 213 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 FOXJ2Q9P0K8 574 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 LRIT1Q9P2V4 623 aa12.46□□□□□ -0.41
TRA2B-206ENST00000456380 SPENQ96T58 3664 aaKnown RBP12.46□□□□□ -0.41
TRA2B-206ENST00000456380 PRAMEF11O60813 436 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 RECQL5O94762 991 aaPredicted RBP12.45□□□□□ -0.42
TRA2B-206ENST00000456380 FAM87AP0C7U9 286 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 WT1P19544 449 aaPredicted RBP12.45□□□□□ -0.42
TRA2B-206ENST00000456380 TRIM23P36406 574 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 CSRP3P50461 194 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 KIAA1024LP59773 190 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 RPL7AP62424 266 aaKnown RBP12.45□□□□□ -0.42
TRA2B-206ENST00000456380 NFKB2Q00653 900 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 RALGDSQ12967 914 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 C14orf28Q4W4Y0 310 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 CFAP58Q5T655 872 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 LIPIQ6XZB0 460 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 MON1BQ7L1V2 547 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 VASH2Q86V25 355 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 DTX1Q86Y01 620 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 PELI3Q8N2H9 469 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 TSEN2Q8NCE0 465 aaKnown RBP12.45□□□□□ -0.42
TRA2B-206ENST00000456380 CCL4L1Q8NHW4 92 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 USP7Q93009 1102 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 TMEM159Q96B96 161 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 CELF6Q96J87 481 aaKnown RBP12.45□□□□□ -0.42
TRA2B-206ENST00000456380 TUBGCP5Q96RT8 1024 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 ARHGAP9Q9BRR9 750 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 LGR4Q9BXB1 951 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 SEMA6CQ9H3T2 930 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 IL17BQ9UHF5 180 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 DACH1Q9UI36 760 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 PCDHGA4Q9Y5G9 962 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 HEMK1Q9Y5R4 338 aaPredicted RBP12.45□□□□□ -0.42
TRA2B-206ENST00000456380 LRP4O75096 1905 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 SCN8AQ9UQD0 1980 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 CFAP69A5D8W1 941 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 C9orf172C9J069 976 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 CACNB4O00305 520 aaPredicted RBP12.45□□□□□ -0.42
TRA2B-206ENST00000456380 FGF10O15520 208 aaPredicted RBP12.45□□□□□ -0.42
TRA2B-206ENST00000456380 CALB1P05937 261 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 HOXC4P09017 264 aaPredicted RBP12.45□□□□□ -0.42
TRA2B-206ENST00000456380 GM2AP17900 193 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 STAT1P42224 750 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 CSNK1DP48730 415 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 PAPOLAP51003 745 aaKnown RBP12.45□□□□□ -0.42
TRA2B-206ENST00000456380 NDST2P52849 883 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 MANEAQ5SRI9 462 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 SRLQ86TD4 932 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 ECHDC3Q96DC8 303 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 NSMCE3Q96MG7 304 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 MCEEQ96PE7 176 aa12.45□□□□□ -0.42
TRA2B-206ENST00000456380 CMKLR1Q99788 373 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms