RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 ITGB6P18564 788 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 SLC15A1P46059 708 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 SUZ12Q15022 739 aaKnown RBP12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 NEPROQ6NW34 567 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 STX12Q86Y82 276 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 ZC3H10Q96K80 434 aaKnown RBP12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 TBCBQ99426 244 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 QTRT2Q9H974 415 aaKnown RBP12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 ZFP14Q9HCL3 533 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 CHMP1AQ9HD42 196 aaPredicted RBP12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 NT5MQ9NPB1 228 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 CRLS1Q9UJA2 301 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 PADI4Q9UM07 663 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 DAGLAQ9Y4D2 1042 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 SMIM22K7EJ46 135 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 FMO3P31513 532 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 CCR1P32246 355 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 RCVRNP35243 200 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 NR2C2P49116 596 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 TPRG1LQ5T0D9 272 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 TMEM198Q66K66 360 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 ILDR2Q71H61 639 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 CUZD1Q86UP6 607 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 SPATA33Q96N06 139 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 CHIAQ9BZP6 476 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 DCSTAMPQ9H295 470 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 FABP12A6NFH5 140 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 C2orf81A6NN90 581 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 TAL1P17542 331 aaPredicted RBP12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 MUTP22033 750 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 SLC7A1P30825 629 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 SREBF1P36956 1147 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 CDH8P55286 799 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 GMFBP60983 142 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 CTBP1Q13363 440 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 EFR3AQ14156 821 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 MPP2Q14168 576 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 FSCN1Q16658 493 aaKnown RBP12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 TBRG1Q3YBR2 411 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 RNASEH2BQ5TBB1 312 aaKnown RBP12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 ANKS3Q6ZW76 656 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 SHC3Q92529 594 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 MKL1Q969V6 931 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 ITPKCQ96DU7 683 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 MRPL57Q9BQC6 102 aaKnown RBP12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 A0A0A0MRY4 1105 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 TMEM150BA6NC51 233 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 PLIN3O60664 434 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 SLITRK3O94933 977 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 CYP1A1P04798 512 aaPredicted RBP12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 CHRNGP07510 517 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 GPC1P35052 558 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 CLK2P49760 499 aaKnown RBP12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 USF2Q15853 346 aaPredicted RBP12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 SLC9B1Q4ZJI4 515 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 LIN54Q6MZP7 749 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 MOXD1Q6UVY6 613 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 PTCHD4Q6ZW05 846 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 KRT77Q7Z794 578 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 RIOX2Q8IUF8 465 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 GPR65Q8IYL9 337 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 NETO2Q8NC67 525 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 FBXL20Q96IG2 436 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 SPATA13Q96N96 652 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 PHOX2BQ99453 314 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 TRIM62Q9BVG3 475 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 C17orf75Q9HAS0 396 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 SNTG1Q9NSN8 517 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 SNTG2Q9NY99 539 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 PDP1Q9P0J1 537 aaPredicted RBP12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 FAM50BQ9Y247 325 aa12.39□□□□□ -0.43
NEDD4L-208ENST00000456173 ECE2O60344 883 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 RSL1D1O76021 490 aaKnown RBP12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 NR3C2P08235 984 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 CDK4P11802 303 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 PSMA1P25786 263 aaKnown RBP12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 CTSKP43235 329 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 BCAT1P54687 386 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 FBXW4P57775 412 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 ELP6Q0PNE2 266 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 TSC22D1Q15714 1073 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 ZNF280DQ6N043 979 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 ZNF549Q6P9A3 640 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 SLC2A7Q6PXP3 512 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 PIH1D2Q8WWB5 315 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 CCDC115Q96NT0 180 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 TRIT1Q9H3H1 467 aaKnown RBP12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 IL17RBQ9NRM6 502 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 IFNA7P01567 189 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 PGRP06401 933 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 ACO1P21399 889 aaKnown RBP12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 RAB10P61026 200 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 SKIV2LQ15477 1246 aaKnown RBP12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 KIAA1841Q6NSI8 718 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 ANKRD49Q8WVL7 239 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 STARD8Q92502 1023 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 ZFP42Q96MM3 310 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 SLC22A4Q9H015 551 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 AMBNQ9NP70 447 aa12.38□□□□□ -0.43
NEDD4L-208ENST00000456173 LYVE1Q9Y5Y7 322 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms