RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 ACVRL1P37023 503 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 EIF2S3P41091 472 aaKnown RBP4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 GABRB2P47870 512 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 RXRGP48443 463 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 ARRB1P49407 418 aaPredicted RBP4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 ACADVLP49748 655 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 OXCT1P55809 520 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 SNX16P57768 344 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 BPIFB4P59827 614 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 KRT83P78385 493 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 ARF5P84085 180 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 FGL2Q14314 439 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 CDO1Q16878 200 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 C15orf59Q2T9L4 293 aaPredicted RBP4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 SLC25A52Q3SY17 297 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 CCDC14Q49A88 953 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 SETMARQ53H47 684 aaPredicted RBP4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 HES3Q5TGS1 186 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 FAM72AQ5TYM5 149 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 NAA35Q5VZE5 725 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 SEL1L3Q68CR1 1132 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 MRM1Q6IN84 353 aaKnown RBP4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 FAM72DQ6L9T8 149 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 LRRC31Q6UY01 552 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 DPY19L3Q6ZPD9 716 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 Q6ZSR6 202 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 KANSL1Q7Z3B3 1105 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 TMC6Q7Z403 805 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 DSG4Q86SJ6 1040 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 CDH24Q86UP0 819 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 TMPRSS12Q86WS5 348 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 TRIM69Q86WT6 500 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 FAM72BQ86X60 149 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 FAM131BQ86XD5 332 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 FAM20CQ8IXL6 584 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 DRC7Q8IY82 874 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 KCT2Q8NC54 265 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 TMEM35BQ8NCS4 154 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 TMIEQ8NEW7 156 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 ZNF397Q8NF99 534 aaPredicted RBP4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 OR6K2Q8NGY2 324 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 GPT2Q8TD30 523 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 SLC20A1Q8WUM9 679 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 NT5C3BQ969T7 300 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 FAM131CQ96AQ9 280 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 BMFQ96LC9 184 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 C1orf74Q96LT6 269 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 BBC3Q96PG8 261 aaPredicted RBP4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 DEPDC7Q96QD5 511 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 PPP1R9BQ96SB3 815 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 YIPF2Q9BWQ6 316 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 NAA15Q9BXJ9 866 aaKnown RBP4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 VPS16Q9H269 839 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 CLSTN2Q9H4D0 955 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 ERVMER34-1Q9H9K5 563 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 NLRC4Q9NPP4 1024 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 TAB2Q9NYJ8 693 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 IL36AQ9UHA7 158 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 DNAI1Q9UI46 699 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 TMEM59LQ9UK28 342 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 STAP1Q9ULZ2 295 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 ZFR2Q9UPR6 939 aaKnown RBP4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 HS3ST2Q9Y278 367 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 RAI2Q9Y5P3 530 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 CEP295Q9C0D2 2601 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 FASNP49327 2511 aaKnown RBP4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 PTPRQQ9UMZ3 2332 aa4.78□□□□□ -1.64
GTF3C3-208ENST00000455546 ZFYVE26Q68DK2 2539 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 DMXL2Q8TDJ6 3036 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 IGLV3-10A0A075B6K4 115 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 FAM95CA0A1B0GW59 222 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 POM121BA6NF01 834 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 IGLON5A6NGN9 336 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 PRAMEF26H0Y7S4 382 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 EPHB6O15197 1021 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 CASC3O15234 703 aaKnown RBP4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 ALOX15BO15296 676 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 SLC7A4O43246 635 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 MAGEC1O60732 1142 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 ZMPSTE24O75844 475 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 F9P00740 461 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 PRB1P04280 392 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 TP53P04637 393 aaPredicted RBP4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 C1SP09871 688 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 GIMD1P0DJR0 217 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 CKMT2P17540 419 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 DGKAP23743 735 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 ADRA1BP35368 520 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 RECQLP46063 649 aaPredicted RBP4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 POLR2FP61218 127 aaKnown RBP4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 GNA12Q03113 381 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 FXNQ16595 210 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 ZNF284Q2VY69 593 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 INAVAQ3KP66 663 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 CARD16Q5EG05 197 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 TCP11X2Q5H9J9 407 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 LRRC73Q5JTD7 316 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 BRMS1LQ5PSV4 323 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 TPRG1LQ5T0D9 272 aa4.77□□□□□ -1.65
GTF3C3-208ENST00000455546 SFMBT2Q5VUG0 894 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms