RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 ABI2Q9NYB9 513 aaPredicted RBP13.38□□□□□ -0.27
LINC00343-203ENST00000454555 SEPT10Q9P0V9 454 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 CHD9Q3L8U1 2897 aa13.38□□□□□ -0.27
LINC00343-203ENST00000454555 LAMA2P24043 3122 aaKnown RBP13.38□□□□□ -0.27
LINC00343-203ENST00000454555 CAPN8A6NHC0 703 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 CLDN5O00501 218 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 GLUD1P00367 558 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 FAM58BPP0C7Q3 252 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 SRGAP2BP0DMP2 458 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 HAPLN1P10915 354 aaPredicted RBP13.37□□□□□ -0.27
LINC00343-203ENST00000454555 BDNFP23560 247 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 PMLP29590 882 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 GRIA2P42262 883 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 TUFMP49411 452 aaKnown RBP13.37□□□□□ -0.27
LINC00343-203ENST00000454555 CDH17Q12864 832 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 ILF2Q12905 390 aaKnown RBP13.37□□□□□ -0.27
LINC00343-203ENST00000454555 ART3Q13508 389 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 TLR1Q15399 786 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 LSM12Q3MHD2 195 aaKnown RBP13.37□□□□□ -0.27
LINC00343-203ENST00000454555 BSPRYQ5W0U4 402 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 NAPRTQ6XQN6 538 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 RTL10Q7L3V2 364 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 PLD6Q8N2A8 252 aaKnown RBP13.37□□□□□ -0.27
LINC00343-203ENST00000454555 TRPC4APQ8TEL6 797 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 CLEC4CQ8WTT0 213 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 STYXQ8WUJ0 223 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 LRRN4Q8WUT4 740 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 PTCD2Q8WV60 388 aaKnown RBP13.37□□□□□ -0.27
LINC00343-203ENST00000454555 EZH1Q92800 747 aaPredicted RBP13.37□□□□□ -0.27
LINC00343-203ENST00000454555 PGAP3Q96FM1 320 aaPredicted RBP13.37□□□□□ -0.27
LINC00343-203ENST00000454555 GCNAQ96QF7 691 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 OR52B2Q96RD2 323 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 EPAS1Q99814 870 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 HAUS8Q9BT25 410 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 NSUN3Q9H649 340 aaKnown RBP13.37□□□□□ -0.27
LINC00343-203ENST00000454555 FBXW11Q9UKB1 542 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 AP4B1Q9Y6B7 739 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 TRIOBPQ9H2D6 2365 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 LAMA3Q16787 3333 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 COL4A4P53420 1690 aaPredicted RBP13.37□□□□□ -0.27
LINC00343-203ENST00000454555 TRIM38O00635 465 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 AIM2O14862 343 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 SEC24AO95486 1093 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 CRTAMO95727 393 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 FAM200BP0CF97 657 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 NPR3P17342 541 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 TFEBP19484 476 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 ERFP50548 548 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 NR1H2P55055 460 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 DUSP4Q13115 394 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 ARL13BQ3SXY8 428 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 CLEC20AQ6ZU45 233 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 PIWIL4Q7Z3Z4 852 aaKnown RBP13.37□□□□□ -0.27
LINC00343-203ENST00000454555 SATL1Q86VE3 508 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 CNTN4Q8IWV2 1026 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 PYROXD2Q8N2H3 581 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 FAM81AQ8TBF8 368 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 MAPK15Q8TD08 544 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 FAM149B1Q96BN6 582 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 CCDC126Q96EE4 140 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 MAELQ96JY0 434 aaKnown RBP13.37□□□□□ -0.27
LINC00343-203ENST00000454555 C8orf48Q96LL4 319 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 CEP295NLQ96MC4 621 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 CDRT15Q96T59 188 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 SMOQ99835 787 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 CRISPLD1Q9H336 500 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 WDR41Q9HAD4 459 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.37□□□□□ -0.27
LINC00343-203ENST00000454555 SUCOQ9UBS9 1254 aaKnown RBP13.37□□□□□ -0.27
LINC00343-203ENST00000454555 DPP7Q9UHL4 492 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 MTCH2Q9Y6C9 303 aa13.37□□□□□ -0.27
LINC00343-203ENST00000454555 HAX1O00165 279 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 PER2O15055 1255 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 ASLP04424 464 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 TFAP2AP05549 437 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 GRIA4P48058 902 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 THOP1P52888 689 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 DNAJB13P59910 316 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 COG7P83436 770 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 NSUN2Q08J23 767 aaKnown RBP eCLIP13.36□□□□□ -0.27
LINC00343-203ENST00000454555 TRAP1Q12931 704 aaKnown RBP13.36□□□□□ -0.27
LINC00343-203ENST00000454555 SEMA3BQ13214 749 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 KCNC3Q14003 757 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.36□□□□□ -0.27
LINC00343-203ENST00000454555 DCAF6Q58WW2 860 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 CCDC149Q6ZUS6 474 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 RBM23Q86U06 439 aaKnown RBP13.36□□□□□ -0.27
LINC00343-203ENST00000454555 EGFL6Q8IUX8 553 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 KREMEN2Q8NCW0 462 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 HIPK4Q8NE63 616 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 ZMIZ2Q8NF64 920 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 B4GALNT2Q8NHY0 566 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 GABPB2Q8TAK5 448 aaPredicted RBP13.36□□□□□ -0.27
LINC00343-203ENST00000454555 SHKBP1Q8TBC3 707 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 ASB9Q96DX5 294 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 DUS3LQ96G46 650 aaKnown RBP13.36□□□□□ -0.27
LINC00343-203ENST00000454555 KIFC1Q9BW19 673 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 C1QTNF1Q9BXJ1 281 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 RHOBTB2Q9BYZ6 727 aa13.36□□□□□ -0.27
LINC00343-203ENST00000454555 SHCBP1LQ9BZQ2 653 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms