RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 FAM46DQ8NEK8 389 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TPCN2Q8NHX9 752 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 BTN2A2Q8WVV5 523 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GLMNQ92990 594 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 RAB7BQ96AH8 199 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ISG20Q96AZ6 181 aaKnown RBP6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ARHGEF26Q96DR7 871 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CCDC97Q96F63 343 aaPredicted RBP6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 C1orf74Q96LT6 269 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 WDR92Q96MX6 357 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 MCEEQ96PE7 176 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SMIM14Q96QK8 99 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 RBM15Q96T37 977 aaKnown RBP eCLIP6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PCDHB18PQ96TA0 734 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TUBGCP2Q9BSJ2 902 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 APOOQ9BUR5 198 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 C1QTNF7Q9BXJ2 289 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NAA15Q9BXJ9 866 aaKnown RBP6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 OSBPL1AQ9BXW6 950 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TTYH3Q9C0H2 523 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 STRADBQ9C0K7 418 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GANQ9H2C0 597 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NDST4Q9H3R1 872 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 DPEP2Q9H4A9 486 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PDFQ9HBH1 243 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CYP4F12Q9HCS2 524 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NLRC4Q9NPP4 1024 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SAMSN1Q9NSI8 373 aaKnown RBP6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SEPT11Q9NVA2 429 aaKnown RBP6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GOLGA6AQ9NYA3 693 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 RRN3Q9NYV6 651 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PPARGC1AQ9UBK2 798 aaKnown RBP6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 IL17BQ9UHF5 180 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 HPCAL4Q9UM19 191 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ATP8A1Q9Y2Q0 1164 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PCDHGA7Q9Y5G6 932 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ST14Q9Y5Y6 855 aa6.03□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TSPAN11A1L157 253 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PRSS38A1L453 326 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CAPN8A6NHC0 703 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TEX33O43247 280 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 KDELR3O43731 214 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 RECQL5O94762 991 aaPredicted RBP6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 FGFR1OPO95684 399 aaKnown RBP6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 POP4O95707 220 aaKnown RBP6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ALPIP09923 528 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ELFN1P0C7U0 828 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 LIFP15018 202 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 NR1D1P20393 614 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 MMP8P22894 467 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 HTR1BP28222 390 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ALDH4A1P30038 563 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 RFC1P35251 1148 aaPredicted RBP6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SCNN1AP37088 669 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 GNPDA1P46926 289 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PPM1FP49593 454 aaPredicted RBP6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 POLE2P56282 527 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 GEMIN4P57678 1058 aaKnown RBP6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 YPEL5P62699 121 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 OGDHQ02218 1023 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PTP4A2Q12974 167 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 MTA1Q13330 715 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SERINC3Q13530 473 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 HLTFQ14527 1009 aaKnown RBP eCLIP6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CYTH1Q15438 398 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 IGFBP7Q16270 282 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CA9Q16790 459 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 UGP2Q16851 508 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 C14orf28Q4W4Y0 310 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 VWA3BQ502W6 1294 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 EFHC2Q5JST6 749 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SCYL2Q6P3W7 929 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ATG14Q6ZNE5 492 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 RFLNAQ6ZTI6 216 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 HEATR4Q86WZ0 1026 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 GKN2Q86XP6 184 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 FAM129CQ86XR2 697 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TSEN2Q8NCE0 465 aaKnown RBP6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 GPR156Q8NFN8 814 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 OR56A4Q8NGH8 313 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 FAM174AQ8TBP5 190 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ART4Q93070 314 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TMEM74Q96NL1 305 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PEBP4Q96S96 227 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CTRCQ99895 268 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TRIM7Q9C029 511 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 MAGEH1Q9H213 219 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 WDR26Q9H7D7 661 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CARS2Q9HA77 564 aaKnown RBP6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZNF71Q9NQZ8 489 aaPredicted RBP6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SPATS2LQ9NUQ6 558 aaKnown RBP6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 KIAA1468Q9P260 1216 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 LRIT1Q9P2V4 623 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 UBA2Q9UBT2 640 aaPredicted RBP6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PLEKHM1Q9Y4G2 1056 aa6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TEP1Q99973 2627 aaKnown RBP6.02□□□□□ -1.45
HLA-DPA3-207ENST00000454398 IGHV5-10-1A0A0J9YXX1 117 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 DFFAO00273 331 aa6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CACNB4O00305 520 aaPredicted RBP6.01□□□□□ -1.45
HLA-DPA3-207ENST00000454398 RIOK3O14730 519 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms