RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 PLXNA4Q9HCM2 1894 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 BRCA2P51587 3418 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 SDHDO14521 159 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 NDST3O95803 873 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 KCNA5P22460 613 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 ATP5C1P36542 298 aaKnown RBP18.25■□□□□ 0.51
MECP2-205ENST00000453960 PPARGP37231 505 aaPredicted RBP18.25■□□□□ 0.51
MECP2-205ENST00000453960 ABL2P42684 1182 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 TUFMP49411 452 aaKnown RBP18.25■□□□□ 0.51
MECP2-205ENST00000453960 INHBCP55103 352 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 PRMT2P55345 433 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 AP2B1P63010 937 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 GNA12Q03113 381 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 BLMHQ13867 455 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 CSHL1Q14406 222 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 RFTN1Q14699 578 aaPredicted RBP18.25■□□□□ 0.51
MECP2-205ENST00000453960 TYSND1Q2T9J0 566 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 TMEM207Q6UWW9 146 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 CHST9Q7L1S5 443 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 SLC22A9Q8IVM8 553 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 LGI2Q8N0V4 545 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 PELI3Q8N2H9 469 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 LRRC43Q8N309 656 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 PLD4Q96BZ4 506 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 FAM136AQ96C01 138 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 L3HYPDHQ96EM0 354 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 TRMOQ9BU70 441 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 MRGBPQ9NV56 204 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 WASF2Q9Y6W5 498 aa18.25■□□□□ 0.51
MECP2-205ENST00000453960 ZNF840PA6NDX5 716 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 TRPC5OSA6NMA1 111 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 ADAM12O43184 909 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 KDELR3O43731 214 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 RPP40O75818 363 aaKnown RBP18.24■□□□□ 0.51
MECP2-205ENST00000453960 JUNP05412 331 aaKnown RBP18.24■□□□□ 0.51
MECP2-205ENST00000453960 SERPINF2P08697 491 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 HMGA1P17096 107 aaKnown RBP18.24■□□□□ 0.51
MECP2-205ENST00000453960 EPHA3P29320 983 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 CDKN2DP55273 166 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 SULT2A1Q06520 285 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 ZNF235Q14590 738 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 KLC3Q6P597 504 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 PRSS55Q6UWB4 352 aaPredicted RBP18.24■□□□□ 0.51
MECP2-205ENST00000453960 PTAR1Q7Z6K3 402 aaPredicted RBP18.24■□□□□ 0.51
MECP2-205ENST00000453960 FBXW8Q8N3Y1 598 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 SPATA6LQ8N4H0 392 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 SHKBP1Q8TBC3 707 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 GIPC2Q8TF65 315 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 ANKRD49Q8WVL7 239 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 TBATAQ96M53 351 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 OSBPL1AQ9BXW6 950 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 NUF2Q9BZD4 464 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.24■□□□□ 0.51
MECP2-205ENST00000453960 SEPT3Q9UH03 358 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 KCTD3Q9Y597 815 aa18.24■□□□□ 0.51
MECP2-205ENST00000453960 ILVBLA1L0T0 632 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 TTC24A2A3L6 582 aaPredicted RBP18.23■□□□□ 0.51
MECP2-205ENST00000453960 CLDN11O75508 207 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 CCDC166P0CW27 439 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 SLC11A2P49281 568 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 CLNS1AP54105 237 aaKnown RBP18.23■□□□□ 0.51
MECP2-205ENST00000453960 PRAMEP78395 509 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 CCNIQ14094 377 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 ZNF549Q6P9A3 640 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 ISCA2Q86U28 154 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 DEFB107AQ8IZN7 70 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 OR52K2Q8NGK3 314 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 DTX3LQ8TDB6 740 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 IFT43Q96FT9 208 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 VN1R3Q9BXE9 311 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 ZBTB26Q9HCK0 441 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 S100A14Q9HCY8 104 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 POMPQ9Y244 141 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 ARIH1Q9Y4X5 557 aaPredicted RBP18.23■□□□□ 0.51
MECP2-205ENST00000453960 A0A0D9SEW6 157 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 TBKBP1A7MCY6 615 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 NT5C1B-RDH14C9J2C7 533 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 GJB3O75712 270 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 CES1P23141 567 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 ETFBP38117 255 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 CUL3Q13618 768 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 DEFB115Q30KQ5 88 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 USP41Q3LFD5 358 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 BBS5Q8N3I7 341 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 OR6P1Q8NGX9 317 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 NSMCE3Q96MG7 304 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 PRICKLE1Q96MT3 831 aaPredicted RBP18.23■□□□□ 0.51
MECP2-205ENST00000453960 MEAF6Q9HAF1 191 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 ACSS2Q9NR19 701 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 NLE1Q9NVX2 485 aaPredicted RBP18.23■□□□□ 0.51
MECP2-205ENST00000453960 AFF4Q9UHB7 1163 aaKnown RBP18.23■□□□□ 0.51
MECP2-205ENST00000453960 TBC1D30Q9Y2I9 924 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 LRCH1Q9Y2L9 728 aa18.23■□□□□ 0.51
MECP2-205ENST00000453960 GOLGA8QA0A0J9YX86 632 aa18.22■□□□□ 0.51
MECP2-205ENST00000453960 LOC100653049A0A140TA62 436 aa18.22■□□□□ 0.51
MECP2-205ENST00000453960 CCDC162PA2VCL2 907 aa18.22■□□□□ 0.51
MECP2-205ENST00000453960 GOLGA8OA6NCC3 632 aa18.22■□□□□ 0.51
MECP2-205ENST00000453960 NEMP2A6NFY4 417 aa18.22■□□□□ 0.51
MECP2-205ENST00000453960 GOLGA8NF8WBI6 632 aa18.22■□□□□ 0.51
MECP2-205ENST00000453960 CD3EAPO15446 510 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms