RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 CDO1Q16878 200 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 CCDC14Q49A88 953 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 PHF19Q5T6S3 580 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 FAM72AQ5TYM5 149 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 KLHDC7AQ5VTJ3 777 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 NAA35Q5VZE5 725 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 SPECC1LQ69YQ0 1117 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 FAM72DQ6L9T8 149 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 TRIM72Q6ZMU5 477 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 VASH2Q86V25 355 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 C17orf82Q86X59 251 aaPredicted RBP14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 FAM72BQ86X60 149 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 ZFAND4Q86XD8 727 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 EMC1Q8N766 993 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 Q8N9G6 341 aaPredicted RBP14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 RXFP2Q8WXD0 754 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 SPOCK2Q92563 424 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 TAAR9Q96RI9 348 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 DDA1Q9BW61 102 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 NAA15Q9BXJ9 866 aaKnown RBP14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 SLC12A9Q9BXP2 914 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 STK33Q9BYT3 514 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 ASPSCR1Q9BZE9 553 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 DPEP2Q9H4A9 486 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 ATP13A3Q9H7F0 1226 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 KIAA1468Q9P260 1216 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 LHX3Q9UBR4 397 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 ANAPC2Q9UJX6 822 aa14.37□□□□□ -0.11
LYSMD3-202ENST00000453259 UNC13CQ8NB66 2214 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 F8VZ95 297 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 KRT10P13645 584 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 UCHL3P15374 230 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 SERPINA4P29622 427 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 ETV5P41161 510 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 HDAC4P56524 1084 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 B4GALNT1Q00973 533 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 SRSF6Q13247 344 aaKnown RBP14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 SQSTM1Q13501 440 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 TPD52L1Q16890 204 aaPredicted RBP14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 VWA3BQ502W6 1294 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 EFHC2Q5JST6 749 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 TAF3Q5VWG9 929 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 DPY19L2P1Q6NXN4 242 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 SLFN11Q7Z7L1 901 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 NOP9Q86U38 636 aaKnown RBP14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 HTR3CQ8WXA8 447 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 CPA5Q8WXQ8 436 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 OR1E3Q8WZA6 343 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 NOL6Q9H6R4 1146 aaKnown RBP14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 WDR26Q9H7D7 661 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 FGF22Q9HCT0 170 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 ANKMY1Q9P2S6 941 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 UBA2Q9UBT2 640 aaPredicted RBP14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 COQ6Q9Y2Z9 468 aa14.36□□□□□ -0.11
LYSMD3-202ENST00000453259 BSNQ9UPA5 3926 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 B4DGG1 531 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 EIF3CLB5ME19 914 aaKnown RBP14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 RASA4BC9J798 803 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 RASA4O43374 803 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 CYP1A1P04798 512 aaPredicted RBP14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 PCCBP05166 539 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 ELFN1P0C7U0 828 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 ITIH2P19823 946 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 NFKBIAP25963 317 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 CASRP41180 1078 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 CCR10P46092 362 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 RAB15P59190 212 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 NFKB2Q00653 900 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 CDR2Q01850 454 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 ILF3Q12906 894 aaKnown RBP eCLIP14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 KCNAB2Q13303 367 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 UBAP2LQ14157 1087 aaKnown RBP14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 C16orf72Q14CZ0 275 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 C15orf59Q2T9L4 293 aaPredicted RBP14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 C2CD6Q53TS8 623 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 LEKR1Q6ZMV7 388 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 AGBL5Q8NDL9 886 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 FAM172AQ8WUF8 416 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 NKD1Q969G9 470 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 FUBP1Q96AE4 644 aaKnown RBP14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 ECHDC3Q96DC8 303 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 EIF3CQ99613 913 aaKnown RBP14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 TUBGCP2Q9BSJ2 902 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 EFHD1Q9BUP0 239 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 GSDMCQ9BYG8 508 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 TRNAU1APQ9NX07 287 aaKnown RBP14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 FHOD1Q9Y613 1164 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 FLNCQ14315 2725 aa14.35□□□□□ -0.11
LYSMD3-202ENST00000453259 COL12A1Q99715 3063 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 A0A1W2PQ67 120 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 ANKRD62A6NC57 917 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 TMEM202A6NGA9 273 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 RHPN2P1A8MT19 583 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 RECQL5O94762 991 aaPredicted RBP14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 PIGNO95427 931 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 MMEP08473 750 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 KRT3P12035 628 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 MYCLP1P12525 358 aaPredicted RBP14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 GP1BBP13224 206 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 CCNB1P14635 433 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms