RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 ANKRD49Q8WVL7 239 aa20.33■□□□□ 0.84
PDCD2-204ENST00000453163 FEM1CQ96JP0 617 aa20.33■□□□□ 0.84
PDCD2-204ENST00000453163 DNAJC1Q96KC8 554 aaKnown RBP20.33■□□□□ 0.84
PDCD2-204ENST00000453163 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.33■□□□□ 0.84
PDCD2-204ENST00000453163 ZNF840PA6NDX5 716 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 COCHO43405 550 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 SMIM24O75264 130 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 CIB2O75838 187 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 CCDC166P0CW27 439 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 KCNA5P22460 613 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 KPNA2P52292 529 aaKnown RBP20.32■□□□□ 0.84
PDCD2-204ENST00000453163 ATN1P54259 1190 aaPredicted RBP20.32■□□□□ 0.84
PDCD2-204ENST00000453163 KLF10Q13118 480 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 FAM83EQ2M2I3 478 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 USP41Q3LFD5 358 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 LSM12Q3MHD2 195 aaKnown RBP20.32■□□□□ 0.84
PDCD2-204ENST00000453163 OR52E8Q6IFG1 317 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.32■□□□□ 0.841e-8■□□□□ 11.2
PDCD2-204ENST00000453163 SH3RF2Q8TEC5 729 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 UCMAQ8WVF2 138 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 CYP4F12Q9HCS2 524 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 TMEM233B4DJY2 109 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 SEC24AO95486 1093 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 S1PR4O95977 384 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 FGF1P05230 155 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 HLA-DPA1P20036 260 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 SGSHP51688 502 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 CDKN2DP55273 166 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 CDK5RAP1Q96SZ6 601 aaKnown RBP20.32■□□□□ 0.84
PDCD2-204ENST00000453163 SPON2Q9BUD6 331 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 VCXQ9H320 206 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 CYP4F11Q9HBI6 524 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 DLGAP2Q9P1A6 1054 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 CRYL1Q9Y2S2 319 aa20.32■□□□□ 0.84
PDCD2-204ENST00000453163 H3BNC9 293 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 KLKB1P03952 638 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 ATP5F1P24539 256 aaPredicted RBP20.31■□□□□ 0.84
PDCD2-204ENST00000453163 SLC11A2P49281 568 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 SLC34A1Q06495 639 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 PDCD2Q16342 344 aaPredicted RBP20.31■□□□□ 0.84
PDCD2-204ENST00000453163 TRMT5Q32P41 509 aaKnown RBP20.31■□□□□ 0.84
PDCD2-204ENST00000453163 C1orf146Q5VVC0 180 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 METTL21CQ5VZV1 264 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 TRIM67Q6ZTA4 783 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 PIM3Q86V86 326 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 OR13C4Q8NGS5 318 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 SCG3Q8WXD2 468 aaKnown RBP20.31■□□□□ 0.84
PDCD2-204ENST00000453163 EXOC2Q96KP1 924 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 HIPK3Q9H422 1215 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 PAPOLBQ9NRJ5 636 aaKnown RBP20.31■□□□□ 0.84
PDCD2-204ENST00000453163 GKN1Q9NS71 199 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 G3BP2Q9UN86 482 aaKnown RBP20.31■□□□□ 0.84
PDCD2-204ENST00000453163 EFEMP2O95967 443 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 SERPINF2P08697 491 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 LTA4HP09960 611 aaKnown RBP20.31■□□□□ 0.84
PDCD2-204ENST00000453163 COX4I1P13073 169 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 SERPINB5P36952 375 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 RGRP47804 291 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 TUFMP49411 452 aaKnown RBP20.31■□□□□ 0.84
PDCD2-204ENST00000453163 MTA1Q13330 715 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 CUL3Q13618 768 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 HECTD3Q5T447 861 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 AGAP9Q5VTM2 703 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 AP1ARQ63HQ0 302 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 TMEM207Q6UWW9 146 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 LRRC74BQ6ZQY2 392 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 GALNT7Q86SF2 657 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 NSMCE3Q96MG7 304 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 MAGEH1Q9H213 219 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 NCKIPSDQ9NZQ3 722 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 VWA7Q9Y334 891 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 WASF2Q9Y6W5 498 aa20.31■□□□□ 0.84
PDCD2-204ENST00000453163 F8W8V4 182 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 FKTNO75072 461 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 SNUPNO95149 360 aaKnown RBP20.3■□□□□ 0.84
PDCD2-204ENST00000453163 GOT2P00505 430 aaKnown RBP20.3■□□□□ 0.84
PDCD2-204ENST00000453163 HMGA1P17096 107 aaKnown RBP20.3■□□□□ 0.84
PDCD2-204ENST00000453163 HK2P52789 917 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 PLK1P53350 603 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 ACTR3P61158 418 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 NSUN2Q08J23 767 aaKnown RBP eCLIP20.3■□□□□ 0.84
PDCD2-204ENST00000453163 ASPHQ12797 758 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 SLC14A2Q15849 920 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 CWF19L1Q69YN2 538 aaKnown RBP20.3■□□□□ 0.84
PDCD2-204ENST00000453163 MFN1Q8IWA4 741 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 TSPAN17Q96FV3 270 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 UBXN10Q96LJ8 280 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 ZNF599Q96NL3 588 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 MGME1Q9BQP7 344 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 STX18Q9P2W9 335 aaKnown RBP20.3■□□□□ 0.84
PDCD2-204ENST00000453163 SSX2IPQ9Y2D8 614 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 ANKRD36A6QL64 1941 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 ANAPC1Q9H1A4 1944 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 NPHS1O60500 1241 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 HNRNPLP14866 589 aaKnown RBP eCLIP20.3■□□□□ 0.84
PDCD2-204ENST00000453163 ITGAXP20702 1163 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 CDH4P55283 916 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 PFKPQ01813 784 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 ACVR1Q04771 509 aa20.3■□□□□ 0.84
PDCD2-204ENST00000453163 C6orf163Q5TEZ5 329 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms