RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 QSOX1O00391 747 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 NVLO15381 856 aaKnown RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 DHHO43323 396 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 PRICKLE3O43900 615 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 HS6ST1O60243 411 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 GPRIN2O60269 458 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 CACNG3O60359 315 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 SCGB2A1O75556 95 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 IPO13O94829 963 aaKnown RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 SCAF4O95104 1147 aaKnown RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 LMNAP02545 664 aaKnown RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 NTRK1P04629 796 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 S100A6P06703 90 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 ENO1P06733 434 aaKnown RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 FGF4P08620 206 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 FAM58BPP0C7Q3 252 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 UBTFL6P0CB48 400 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 THRBP10828 461 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 HSPA8P11142 646 aaKnown RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 PCNAP12004 261 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 ACP5P13686 325 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF8P17098 575 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 CTPS1P17812 591 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 TRIM21P19474 475 aaKnown RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 ITIH1P19827 911 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 CHRM3P20309 590 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 FPR1P21462 350 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 PTGS1P23219 599 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 APEX1P27695 318 aaKnown RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 CORO1AP31146 461 aaKnown RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 SLC6A11P48066 632 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 CAMPP49913 170 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 EFNB1P98172 346 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 PTH1RQ03431 593 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 TAP2Q03519 686 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 CD69Q07108 199 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 SLFN5Q08AF3 891 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 ABHD18Q0P651 414 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 DBPQ10586 325 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 NFATC3Q12968 1075 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 CSTF3Q12996 717 aaKnown RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 IDI1Q13907 227 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 RUNX2Q13950 521 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZRSR1Q15695 479 aaKnown RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 CNGA3Q16281 694 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 SGCBQ16585 318 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 GSTA3Q16772 222 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 ASTE1Q2TB18 679 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 PABPC1LQ4VXU2 614 aaKnown RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 TAF1BQ53T94 588 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 RUNDC3AQ59EK9 446 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 C6orf163Q5TEZ5 329 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 KRT39Q6A163 491 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 SLC9A4Q6AI14 798 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 FCRLBQ6BAA4 426 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 RAET1GQ6H3X3 334 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 NOTUMQ6P988 496 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 C15orf39Q6ZRI6 1047 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 TRAPPC11Q7Z392 1133 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 SLC46A3Q7Z3Q1 461 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 BMP8AQ7Z5Y6 402 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 LUZP1Q86V48 1076 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 DCP2Q8IU60 420 aaKnown RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 CCDC65Q8IXS2 484 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF679Q8IYX0 411 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 TTC5Q8N0Z6 440 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 MMP21Q8N119 569 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 CARFQ8N187 725 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 BATF2Q8N1L9 274 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 TRIML2Q8N7C3 387 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 AGBL3Q8NEM8 1001 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 OR52E1Q8NGJ3 308 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 NSMCE1Q8WV22 266 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 SLC9A6Q92581 669 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 ALG3Q92685 438 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 KAT2AQ92830 837 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 BCL2L2Q92843 193 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 EXT2Q93063 718 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 RNFT2Q96EX2 444 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 TPD52L3Q96J77 140 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 C8orf76Q96K31 380 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 NSMCE2Q96MF7 247 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF558Q96NG5 402 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZBTB18Q99592 522 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 CCT7Q99832 543 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 NUDT22Q9BRQ3 303 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 C17orf80Q9BSJ5 609 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 OSBPL8Q9BZF1 889 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 POLR1EQ9GZS1 481 aaKnown RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF350Q9GZX5 532 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 NACA2Q9H009 215 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 CLPBQ9H078 707 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 AKIRIN1Q9H9L7 192 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 TUFT1Q9NNX1 390 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 DNAJC11Q9NVH1 559 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 FAM118AQ9NWS6 357 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 WSB2Q9NYS7 404 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 ERAP1Q9NZ08 941 aa4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 IPO11Q9UI26 975 aaKnown RBP4.49□□□□□ -1.69
HMGB3P21-201ENST00000452483 AGO2Q9UKV8 859 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms