RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 COQ6Q9Y2Z9 468 aa21.81■■□□□ 1.08
C9orf3-208ENST00000451893 ASPMQ8IZT6 3477 aa21.81■■□□□ 1.08
C9orf3-208ENST00000451893 SPEGQ15772 3267 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 CPED1A4D0V7 1026 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 TOR1BO14657 336 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 LRCH4O75427 683 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 MT-CO3P00414 261 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 CAPNS1P04632 268 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 ANXA6P08133 673 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 ITIH2P19823 946 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 BLKP51451 505 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 RENBPP51606 427 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 PFN3P60673 137 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 INSM1Q01101 510 aaPredicted RBP21.8■■□□□ 1.08
C9orf3-208ENST00000451893 PPARDQ03181 441 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 ZNF235Q14590 738 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 RFTN1Q14699 578 aaPredicted RBP21.8■■□□□ 1.08
C9orf3-208ENST00000451893 ACAP1Q15027 740 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 LRRC14Q15048 493 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 UGP2Q16851 508 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 COL28A1Q2UY09 1125 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 DEFB133Q30KQ1 61 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 PRRT3Q5FWE3 981 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 SRLQ86TD4 932 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 PHACTR4Q8IZ21 702 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 LZTR1Q8N653 840 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 LRRC57Q8N9N7 239 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 MAPK15Q8TD08 544 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 DEPDC7Q96QD5 511 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 NRSN2Q9GZP1 204 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 PDFQ9HBH1 243 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 PCDH12Q9NPG4 1184 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 CDC23Q9UJX2 597 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 GPSM3Q9Y4H4 160 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 SAR1BQ9Y6B6 198 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 CSNK1G3Q9Y6M4 447 aa21.8■■□□□ 1.08
C9orf3-208ENST00000451893 GRID2IPA4D2P6 1211 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 FANCGO15287 622 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 CTSEP14091 401 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 TCP1P17987 556 aaKnown RBP21.79■■□□□ 1.08
C9orf3-208ENST00000451893 RPIAP49247 311 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 SCNN1BP51168 640 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 IL10RBQ08334 325 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 PIGHQ14442 188 aaPredicted RBP21.79■■□□□ 1.08
C9orf3-208ENST00000451893 KRT81Q14533 505 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 IRF4Q15306 451 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 TMEM52BQ4KMG9 183 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 C11orf63Q6NUN7 778 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 TMCO3Q6UWJ1 677 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 MACC1Q6ZN28 852 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 CAMK1DQ8IU85 385 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 TSEN2Q8NCE0 465 aaKnown RBP21.79■■□□□ 1.08
C9orf3-208ENST00000451893 ATL2Q8NHH9 583 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 IFI44Q8TCB0 444 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 CENPTQ96BT3 561 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 GPR27Q9NS67 375 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.79■■□□□ 1.08
C9orf3-208ENST00000451893 SEPT3Q9UH03 358 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 ATP8A1Q9Y2Q0 1164 aa21.79■■□□□ 1.08
C9orf3-208ENST00000451893 URB1O60287 2271 aaKnown RBP21.78■■□□□ 1.08
C9orf3-208ENST00000451893 TMEM110-MUSTN1A8MSY1 372 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 RRP8O43159 456 aaKnown RBP21.78■■□□□ 1.08
C9orf3-208ENST00000451893 SPINT1O43278 529 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 PCCBP05166 539 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 MYF5P13349 255 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 C6P13671 934 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 NFKBIAP25963 317 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 PCK1P35558 622 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 POLR2LP62875 67 aaKnown RBP21.78■■□□□ 1.08
C9orf3-208ENST00000451893 TUBB4BP68371 445 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 NR0B2Q15466 257 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 CDKN3Q16667 212 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 WHAMMP3Q1A5X7 153 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 BOLA3Q53S33 107 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 TMCO4Q5TGY1 634 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 MEI1Q5TIA1 1274 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 RD3Q7Z3Z2 195 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 RBFAQ8N0V3 343 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 SCG3Q8WXD2 468 aaKnown RBP21.78■■□□□ 1.08
C9orf3-208ENST00000451893 NUP85Q9BW27 656 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 SYNDIG1Q9H7V2 258 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 CWC15Q9P013 229 aaKnown RBP21.78■■□□□ 1.08
C9orf3-208ENST00000451893 RNF14Q9UBS8 474 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 IP6K2Q9UHH9 426 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 ANAPC7Q9UJX3 599 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 MRFAP1Q9Y605 127 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 LRRK1Q38SD2 2015 aa21.78■■□□□ 1.08
C9orf3-208ENST00000451893 RIOK3O14730 519 aaKnown RBP21.77■■□□□ 1.08
C9orf3-208ENST00000451893 PRKCGP05129 697 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 GP1BAP07359 652 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 ELFN1P0C7U0 828 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 SERPINB6P35237 376 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 ABCG1P45844 678 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 HCAR3P49019 387 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 LIG3P49916 1009 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 EIF2B5Q13144 721 aaKnown RBP21.77■■□□□ 1.08
C9orf3-208ENST00000451893 C1orf61Q13536 156 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 LBRQ14739 615 aaKnown RBP21.77■■□□□ 1.08
C9orf3-208ENST00000451893 ESRP1Q6NXG1 681 aaKnown RBP21.77■■□□□ 1.08
C9orf3-208ENST00000451893 ENPP7Q6UWV6 458 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms