RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 SPATA6LQ8N4H0 392 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 FRS2Q8WU20 508 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 PEX13Q92968 403 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 NEUROG3Q9Y4Z2 214 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 CPQQ9Y646 472 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 TRBV5-4A0A0C4DH59 114 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 CLDN11O75508 207 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 POU2F2P09086 479 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 CSKP41240 450 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 SERPINH1P50454 418 aaKnown RBP6.62□□□□□ -1.35
USP46-202ENST00000451218 KDELC2Q7Z4H8 507 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 ISCA2Q86U28 154 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 PHYKPLQ8IUZ5 450 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 SFTPA1Q8IWL2 248 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 PELI3Q8N2H9 469 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 MYLIPQ8WY64 445 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 TMEM237Q96Q45 408 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 CDK5RAP1Q96SZ6 601 aaKnown RBP6.62□□□□□ -1.35
USP46-202ENST00000451218 TMEM120AQ9BXJ8 343 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 OSBPL1AQ9BXW6 950 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 C20orf96Q9NUD7 363 aaPredicted RBP6.62□□□□□ -1.35
USP46-202ENST00000451218 YBX2Q9Y2T7 364 aaKnown RBP6.62□□□□□ -1.35
USP46-202ENST00000451218 SLC4A7Q9Y6M7 1214 aa6.62□□□□□ -1.35
USP46-202ENST00000451218 CCDC189A1A4V9 331 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 CCDC162PA2VCL2 907 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 GRM6O15303 877 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 PHGDHO43175 533 aaKnown RBP6.61□□□□□ -1.35
USP46-202ENST00000451218 SGTAO43765 313 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 KLK8O60259 260 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 KRT37O76014 449 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 CBX6O95503 412 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 GOT2P00505 430 aaKnown RBP6.61□□□□□ -1.35
USP46-202ENST00000451218 CDC25CP30307 473 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 LIG3P49916 1009 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 KPNA1P52294 538 aaPredicted RBP6.61□□□□□ -1.35
USP46-202ENST00000451218 LMAN2Q12907 356 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 CHI3L2Q15782 390 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 PCSK7Q16549 785 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 PTPRNQ16849 979 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 C9orf50Q5SZB4 431 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 PSAPL1Q6NUJ1 521 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 ZYG11AQ6WRX3 759 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 PDZD4Q76G19 769 aaPredicted RBP6.61□□□□□ -1.35
USP46-202ENST00000451218 C12orf40Q86WS4 652 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 RNF135Q8IUD6 432 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 ZNF781Q8N8C0 355 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 KCTD4Q8WVF5 259 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 NXNL1Q96CM4 212 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 GRAMD1AQ96CP6 724 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 ATXN7L3BQ96GX2 97 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 EXOC2Q96KP1 924 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 SLC40A1Q9NP59 571 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 ZFATQ9P243 1243 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 PCDHB12Q9Y5F1 795 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 A0A096LPK6 155 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 COPEO14579 308 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 TRIM24O15164 1050 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 SLC7A4O43246 635 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 CLASP2O75122 1294 aaKnown RBP6.61□□□□□ -1.35
USP46-202ENST00000451218 LUC7L3O95232 432 aaKnown RBP6.61□□□□□ -1.35
USP46-202ENST00000451218 SERPINB8P50452 374 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 HK3P52790 923 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 YBX1P67809 324 aaKnown RBP6.61□□□□□ -1.35
USP46-202ENST00000451218 RFTN1Q14699 578 aaPredicted RBP6.61□□□□□ -1.35
USP46-202ENST00000451218 MPP7Q5T2T1 576 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 VWA5B1Q5TIE3 1220 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 RINLQ6ZS11 566 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 RPS27LQ71UM5 84 aaKnown RBP6.61□□□□□ -1.35
USP46-202ENST00000451218 NLRP9Q7RTR0 991 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 KDM1BQ8NB78 822 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 HEXDCQ8WVB3 486 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 RNF34Q969K3 372 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 TSSK1BQ9BXA7 367 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 GSTO2Q9H4Y5 243 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 PNPOQ9NVS9 261 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 CDH22Q9UJ99 828 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 F5H5T6 163 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 LEFTY2O00292 366 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 TSPAN3O60637 253 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 GLRA3O75311 464 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 KRT38O76015 456 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 C1RP00736 705 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 CISD3P0C7P0 127 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 PIRTP0C851 137 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 EPCAMP16422 314 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 SLC8A1P32418 973 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 ETFBP38117 255 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 IDH3AP50213 366 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 NFKB2Q00653 900 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 B4GALNT1Q00973 533 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 VAC14Q08AM6 782 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 OR4D1Q15615 310 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 TAF1BQ53T94 588 aaPredicted RBP6.61□□□□□ -1.35
USP46-202ENST00000451218 INO80DQ53TQ3 878 aaPredicted RBP6.61□□□□□ -1.35
USP46-202ENST00000451218 EPGNQ6UW88 154 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 CPLX4Q7Z7G2 160 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 MTDHQ86UE4 582 aaKnown RBP6.61□□□□□ -1.35
USP46-202ENST00000451218 CTAGE3PQ8IX95 158 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 ATOH8Q96SQ7 321 aa6.61□□□□□ -1.35
USP46-202ENST00000451218 NDNQ99608 321 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms