RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 APMAPQ9HDC9 416 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 DDIT4Q9NX09 232 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 COX16Q9P0S2 106 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 PDP2Q9P2J9 529 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 RCOR3Q9P2K3 495 aaPredicted RBP12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 CROTQ9UKG9 612 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 FCF1Q9Y324 198 aaKnown RBP12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 ZNF451Q9Y4E5 1061 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 HS3ST4Q9Y661 456 aa12.66□□□□□ -0.38
AC004540.1-204ENST00000449537 GOLGA6L4A6NEF3 574 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 TMEM202A6NGA9 273 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 PRSS44E7EML9 344 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 KRIT1O00522 736 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 TNFRSF10CO14798 259 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 POLR1CO15160 346 aaPredicted RBP12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 ECEL1O95672 775 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 POP4O95707 220 aaKnown RBP12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 UGT2B4P06133 528 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 PAEPP09466 180 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 ITIH2P19823 946 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 BMP6P22004 513 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 CSF2RBP32927 897 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 PSMC2P35998 433 aaKnown RBP12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 ACADSBP45954 432 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 PPM1FP49593 454 aaPredicted RBP12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 MXI1P50539 228 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 CCL11P51671 97 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 PER3P56645 1201 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 STILQ15468 1287 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 SNAP47Q5SQN1 464 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 PAPD7Q5XG87 772 aaKnown RBP12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 C6orf15Q6UXA7 325 aaPredicted RBP12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 SPNS3Q6ZMD2 512 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 OR7D4Q8NG98 312 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 ISG20Q96AZ6 181 aaKnown RBP12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 MED15Q96RN5 788 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 ZSWIM1Q9BR11 485 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 OSBPL1AQ9BXW6 950 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 ZMYND15Q9H091 742 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 FGF22Q9HCT0 170 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 MOSPD1Q9UJG1 213 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 COQ6Q9Y2Z9 468 aa12.65□□□□□ -0.38
AC004540.1-204ENST00000449537 CROCCQ5TZA2 2017 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 CACNB4O00305 520 aaPredicted RBP12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 PPM1DO15297 605 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 PAGE1O75459 146 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 ZMPSTE24O75844 475 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 KELP23276 732 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 NR2F2P24468 414 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 ITGA3P26006 1051 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 OR1E1P30953 314 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 RPL34P49207 117 aaKnown RBP12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 MTM1Q13496 603 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 CUL4BQ13620 913 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 ZRSR2Q15696 482 aaKnown RBP12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 MYLK3Q32MK0 819 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 TMEM52BQ4KMG9 183 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 ANKRD40Q6AI12 368 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 TMEM270Q6UE05 265 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 GDPD4Q6W3E5 623 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 GDF7Q7Z4P5 450 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 ARHGAP22Q7Z5H3 698 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 SLC47A2Q86VL8 602 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 KIAA0895Q8NCT3 520 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 PNPLA2Q96AD5 504 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 SNRNP40Q96DI7 357 aaKnown RBP12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 CCDC34Q96HJ3 373 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 AHCYL2Q96HN2 611 aaKnown RBP12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 THAP9Q9H5L6 903 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 MAGEF1Q9HAY2 307 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 ATP13A1Q9HD20 1204 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 ACSS2Q9NR19 701 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 ASF1BQ9NVP2 202 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 TRAF3IP3Q9Y228 551 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 PCDHGB7Q9Y5F8 929 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 CSMD2Q7Z408 3487 aa12.64□□□□□ -0.39
AC004540.1-204ENST00000449537 ILVBLA1L0T0 632 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 STX10O60499 249 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 PCCBP05166 539 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 CCNB1P14635 433 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 HOXB4P17483 251 aaPredicted RBP12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 BRD2P25440 801 aaKnown RBP12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 NFKBIAP25963 317 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 STAT1P42224 750 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 UBE2HP62256 183 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 SNRPD1P62314 119 aaKnown RBP12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 GPLD1P80108 840 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 ARF5P84085 180 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 TESK1Q15569 626 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 NFKBIBQ15653 356 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 TSR1Q2NL82 804 aaKnown RBP12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 FOXD4L6Q3SYB3 417 aaPredicted RBP12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 EFHC1Q5JVL4 640 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 FOXD4L3Q6VB84 417 aaPredicted RBP12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 TFAP2DQ7Z6R9 452 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 MMP21Q8N119 569 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 ANP32EQ9BTT0 268 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 GSDMCQ9BYG8 508 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 ULBP3Q9BZM4 244 aa12.63□□□□□ -0.39
AC004540.1-204ENST00000449537 TAAR2Q9P1P5 351 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms