RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 SASH3O75995 380 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 EPHB1P54762 984 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 SEC13P55735 322 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 EIF3BP55884 814 aaKnown RBP19.35■□□□□ 0.69
RPS28-202ENST00000449223 TAF1AQ15573 450 aaPredicted RBP19.35■□□□□ 0.69
RPS28-202ENST00000449223 ANKRD20A4Q4UJ75 823 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 LRIG3Q6UXM1 1119 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 NDUFAF2Q8N183 169 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 RSPH9Q9H1X1 276 aaPredicted RBP19.35■□□□□ 0.69
RPS28-202ENST00000449223 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.35■□□□□ 0.69
RPS28-202ENST00000449223 FETUBQ9UGM5 382 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 SPO11Q9Y5K1 396 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 SCN8AQ9UQD0 1980 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 ADAM23O75077 832 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 TCEA3O75764 348 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 CRTAMO95727 393 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 ITGB7P26010 798 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 SLC8A1P32418 973 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 STX2P32856 288 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 PDE1BQ01064 536 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 CDKN3Q16667 212 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 UGP2Q16851 508 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 SDE2Q6IQ49 451 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 USP45Q70EL2 814 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 PIP4K2CQ8TBX8 421 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 BLOC1S5Q8TDH9 187 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 MFSD3Q96ES6 412 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 PPP1R16AQ96I34 528 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 SHDQ96IW2 340 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 PKNOX2Q96KN3 472 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 TRIM56Q9BRZ2 755 aaKnown RBP19.35■□□□□ 0.69
RPS28-202ENST00000449223 TMEM109Q9BVC6 243 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 ACSS3Q9H6R3 686 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 VPS37BQ9H9H4 285 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 ZDHHC4Q9NPG8 344 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 SARDHQ9UL12 918 aa19.35■□□□□ 0.69
RPS28-202ENST00000449223 ZNF106Q9H2Y7 1883 aaKnown RBP19.34■□□□□ 0.69
RPS28-202ENST00000449223 RNF40O75150 1001 aa19.34■□□□□ 0.69
RPS28-202ENST00000449223 SUOXP51687 545 aa19.34■□□□□ 0.69
RPS28-202ENST00000449223 STAT4Q14765 748 aa19.34■□□□□ 0.69
RPS28-202ENST00000449223 C2orf27AQ580R0 203 aa19.34■□□□□ 0.69
RPS28-202ENST00000449223 TSTD2Q5T7W7 516 aa19.34■□□□□ 0.69
RPS28-202ENST00000449223 TTC30BQ8N4P2 665 aa19.34■□□□□ 0.69
RPS28-202ENST00000449223 MDGA1Q8NFP4 955 aa19.34■□□□□ 0.69
RPS28-202ENST00000449223 STYXQ8WUJ0 223 aa19.34■□□□□ 0.69
RPS28-202ENST00000449223 CFAP36Q96G28 342 aa19.34■□□□□ 0.69
RPS28-202ENST00000449223 ZNF778Q96MU6 729 aa19.34■□□□□ 0.69
RPS28-202ENST00000449223 FCRL3Q96P31 734 aaPredicted RBP19.34■□□□□ 0.69
RPS28-202ENST00000449223 PPCSQ9HAB8 311 aa19.34■□□□□ 0.69
RPS28-202ENST00000449223 RABGEF1Q9UJ41 708 aa19.34■□□□□ 0.69
RPS28-202ENST00000449223 PLAAQ9Y263 795 aa19.34■□□□□ 0.69
RPS28-202ENST00000449223 MRPS17Q9Y2R5 130 aaKnown RBP19.34■□□□□ 0.69
RPS28-202ENST00000449223 ATG2BQ96BY7 2078 aa19.34■□□□□ 0.69
RPS28-202ENST00000449223 BPTFQ12830 3046 aa19.33■□□□□ 0.69
RPS28-202ENST00000449223 A0A1W2PQF6 199 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 KRBA1A5PL33 1030 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 C16orf96A6NNT2 1141 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 UPK3BL1B0FP48 263 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 UPK3BL2E5RIL1 263 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 C1QTNF3-AMACRE9PGA6 284 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 SYNCRIPO60506 623 aaKnown RBP19.33■□□□□ 0.68
RPS28-202ENST00000449223 PRKCGP05129 697 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 CHRNB1P11230 501 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 NFKBIAP25963 317 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 NMBRP28336 390 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 HMGCLP35914 325 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 ZNF140P52738 457 aaPredicted RBP19.33■□□□□ 0.68
RPS28-202ENST00000449223 STARD3Q14849 445 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 FAM46CQ5VWP2 391 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 KIAA0930Q6ICG6 404 aaPredicted RBP19.33■□□□□ 0.68
RPS28-202ENST00000449223 GLT6D1Q7Z4J2 308 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.33■□□□□ 0.681e-6■■■■□ 25.2
RPS28-202ENST00000449223 OR13J1Q8NGT2 312 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 OR2T3Q8NH03 318 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 ZNF669Q96BR6 464 aaPredicted RBP19.33■□□□□ 0.68
RPS28-202ENST00000449223 ZIM3Q96PE6 472 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 CA14Q9ULX7 337 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 ZNF711Q9Y462 761 aa19.33■□□□□ 0.68
RPS28-202ENST00000449223 C2orf81A6NN90 581 aa19.32■□□□□ 0.68
RPS28-202ENST00000449223 CHURC1-FNTBB4DL54 471 aa19.32■□□□□ 0.68
RPS28-202ENST00000449223 KLF8O95600 359 aaPredicted RBP19.32■□□□□ 0.68
RPS28-202ENST00000449223 SHBGP04278 402 aa19.32■□□□□ 0.68
RPS28-202ENST00000449223 PIRTP0C851 137 aa19.32■□□□□ 0.68
RPS28-202ENST00000449223 TIMP2P16035 220 aa19.32■□□□□ 0.68
RPS28-202ENST00000449223 CD72P21854 359 aa19.32■□□□□ 0.68
RPS28-202ENST00000449223 HNF1BP35680 557 aa19.32■□□□□ 0.68
RPS28-202ENST00000449223 COPAP53621 1224 aa19.32■□□□□ 0.68
RPS28-202ENST00000449223 PARS2Q7L3T8 475 aaKnown RBP19.32■□□□□ 0.68
RPS28-202ENST00000449223 TXNDC5Q8NBS9 432 aaKnown RBP19.32■□□□□ 0.68
RPS28-202ENST00000449223 FBF1Q8TES7 1133 aa19.32■□□□□ 0.68
RPS28-202ENST00000449223 CERS2Q96G23 380 aa19.32■□□□□ 0.68
RPS28-202ENST00000449223 CYTH2Q99418 400 aa19.32■□□□□ 0.68
RPS28-202ENST00000449223 NELL2Q99435 816 aa19.32■□□□□ 0.68
RPS28-202ENST00000449223 HDAC8Q9BY41 377 aa19.32■□□□□ 0.68
RPS28-202ENST00000449223 NLE1Q9NVX2 485 aaPredicted RBP19.32■□□□□ 0.68
RPS28-202ENST00000449223 MMP17Q9ULZ9 603 aa19.32■□□□□ 0.68
RPS28-202ENST00000449223 ARL5AQ9Y689 179 aa19.32■□□□□ 0.68
RPS28-202ENST00000449223 KANSL1LA0AUZ9 987 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 FAM159BA6NKW6 160 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 KPNA3O00505 521 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms