RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 CCHCR1Q8TD31 782 aa11.9□□□□□ -0.5
RCL1-208ENST00000448872 SCRN2Q96FV2 425 aa11.9□□□□□ -0.5
RCL1-208ENST00000448872 PPP1R2P1Q96PQ5 205 aa11.9□□□□□ -0.5
RCL1-208ENST00000448872 MCCC1Q96RQ3 725 aaPredicted RBP11.9□□□□□ -0.5
RCL1-208ENST00000448872 GPR174Q9BXC1 333 aa11.9□□□□□ -0.5
RCL1-208ENST00000448872 BTBD1Q9H0C5 482 aa11.9□□□□□ -0.5
RCL1-208ENST00000448872 C6orf106Q9H6K1 298 aaPredicted RBP11.9□□□□□ -0.5
RCL1-208ENST00000448872 WSB2Q9NYS7 404 aaPredicted RBP11.9□□□□□ -0.5
RCL1-208ENST00000448872 DMGDHQ9UI17 866 aaKnown RBP11.9□□□□□ -0.5
RCL1-208ENST00000448872 TPX2Q9ULW0 747 aaKnown RBP11.9□□□□□ -0.5
RCL1-208ENST00000448872 SHOC2Q9UQ13 582 aa11.9□□□□□ -0.5
RCL1-208ENST00000448872 PPIL1Q9Y3C6 166 aa11.9□□□□□ -0.5
RCL1-208ENST00000448872 TBC1D3DA0A087WVF3 549 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 TBC1D3IA0A087WXS9 549 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 TBC1D3EA0A087X179 549 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 TBC1D3KA0A087X1G2 549 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 GOLGA6CA6NDK9 693 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 GOLGA6BA6NDN3 693 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 TBC1D3FA6NER0 549 aaPredicted RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 CAPN8A6NHC0 703 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 TBC1D3LB9A6J9 549 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 NEMP1O14524 444 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 SLC7A4O43246 635 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 HRO43593 1189 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 MMP20O60882 483 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 AVILO75366 819 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 SEC31AO94979 1220 aaKnown RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 HEXIM1O94992 359 aaKnown RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 PCDH8O95206 1070 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 SEMA4FO95754 770 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 EPOP01588 193 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 TBC1D3HP0C7X1 549 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 GOLGA6DP0CG33 693 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 HLA-DPA1P20036 260 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 TPSB2P20231 275 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 MMP12P39900 470 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 ITGA8P53708 1063 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 RPL26P61254 145 aaKnown RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 POLR2LP62875 67 aaKnown RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 GUCY2DQ02846 1103 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 MSLNQ13421 630 aaPredicted RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 TPSAB1Q15661 275 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 CDKN3Q16667 212 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 USP39Q53GS9 565 aaKnown RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 DENND2CQ68D51 928 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 TBC1D3GQ6DHY5 549 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 TBC1D3CQ6IPX1 549 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 ERAP2Q6P179 960 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 CRTC1Q6UUV9 634 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 PPP1R21Q6ZMI0 780 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 RFLNAQ6ZTI6 216 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 MICALCLQ6ZW33 695 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 USP45Q70EL2 814 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 KBTBD6Q86V97 674 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 PPIL6Q8IXY8 311 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 TBC1D3Q8IZP1 549 aaPredicted RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 BLOC1S5Q8TDH9 187 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 NELL1Q92832 810 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 KLK6Q92876 244 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 LRRC45Q96CN5 670 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 EID2BQ96D98 161 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 SNF8Q96H20 258 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 EPC1Q9H2F5 836 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 CASS4Q9NQ75 786 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 EIF2B3Q9NR50 452 aaKnown RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 GOLGA6AQ9NYA3 693 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 GRHL1Q9NZI5 618 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 RPL26L1Q9UNX3 145 aaKnown RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 ZFR2Q9UPR6 939 aaKnown RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 COQ6Q9Y2Z9 468 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 USP34Q70CQ2 3546 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 CCDC163A0A0D9SF12 145 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 A0A1W2PQ67 120 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 A0A1W2PQU0 124 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 ERI2A8K979 691 aaKnown RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 H0Y858 1186 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 PSMD3O43242 534 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 BUD23O43709 281 aaKnown RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 RNGTTO60942 597 aaKnown RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 CLDN7O95471 211 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 FGF1P05230 155 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 RHOXF2BP0C7M4 288 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 OXTRP30559 389 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 MAT2AP31153 395 aaKnown RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 VIPR1P32241 457 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 TNNT3P45378 269 aaPredicted RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 LIG3P49916 1009 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 SESN2P58004 480 aaPredicted RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 CRADDP78560 199 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 FGL2Q14314 439 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 PTPRCAPQ14761 206 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 CNGA3Q16281 694 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 TMEM52BQ4KMG9 183 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 TEX35Q5T0J7 233 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 CERCAMQ5T4B2 595 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 LRRC66Q68CR7 880 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 NAPEPLDQ6IQ20 393 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 CCDC70Q6NSX1 233 aa11.89□□□□□ -0.51
RCL1-208ENST00000448872 HIBCHQ6NVY1 386 aaPredicted RBP11.89□□□□□ -0.51
RCL1-208ENST00000448872 DPPA4Q7L190 304 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms