RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 ARHGEF38Q9NXL2 777 aa13.73□□□□□ -0.21
POLR1B-209ENST00000448770 MARCH4Q9P2E8 410 aaPredicted RBP13.73□□□□□ -0.21
POLR1B-209ENST00000448770 A0A1B0GTL3 188 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 RRN3P2A6NIE6 340 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 XPOTO43592 962 aaKnown RBP13.72□□□□□ -0.21
POLR1B-209ENST00000448770 IGLV3-25P01717 112 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 GPX3P22352 226 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 OXTRP30559 389 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 SH3BGRP55822 239 aaPredicted RBP13.72□□□□□ -0.21
POLR1B-209ENST00000448770 POU4F1Q01851 419 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 STX5Q13190 355 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 C14orf80Q86SX3 495 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 OR13J1Q8NGT2 312 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 NPLOC4Q8TAT6 608 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 RNF34Q969K3 372 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 MAML3Q96JK9 1138 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 UBXN10Q96LJ8 280 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 ANKRD60Q9BZ19 345 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 ALG9Q9H6U8 611 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 RBM22Q9NW64 420 aaKnown RBP eCLIP13.72□□□□□ -0.213e-7■■■■□ 20.5
POLR1B-209ENST00000448770 SMOXQ9NWM0 555 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 MPP6Q9NZW5 540 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 EBF1Q9UH73 591 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 CROTQ9UKG9 612 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 TRAF6Q9Y4K3 522 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 FAM155AB1AL88 458 aaPredicted RBP13.72□□□□□ -0.21
POLR1B-209ENST00000448770 H0YJX3 145 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 FXYD1O00168 92 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 CLIC3O95833 236 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 CAPN3P20807 821 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 BDNFP23560 247 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 CDK9P50750 372 aaKnown RBP13.72□□□□□ -0.21
POLR1B-209ENST00000448770 APLP1P51693 650 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 MAXP61244 160 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 PRAMEP78395 509 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 TRAP1Q12931 704 aaKnown RBP13.72□□□□□ -0.21
POLR1B-209ENST00000448770 PAN2Q504Q3 1202 aaKnown RBP13.72□□□□□ -0.21
POLR1B-209ENST00000448770 GPR158Q5T848 1215 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 MANEALQ5VSG8 457 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 FAM45BPQ6NSW5 357 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 POTEHQ6S545 545 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 KDELC1Q6UW63 502 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 LPCAT2Q7L5N7 544 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 FASTKD5Q7L8L6 764 aaKnown RBP13.72□□□□□ -0.21
POLR1B-209ENST00000448770 TRIML2Q8N7C3 387 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 FAM45AQ8TCE6 357 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 TOP1MTQ969P6 601 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 POLR3BQ9NW08 1133 aaPredicted RBP13.72□□□□□ -0.21
POLR1B-209ENST00000448770 EGFL7Q9UHF1 273 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 KCTD3Q9Y597 815 aa13.72□□□□□ -0.21
POLR1B-209ENST00000448770 CROCCQ5TZA2 2017 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 MATN3O15232 486 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 PAGE1O75459 146 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 GJB3O75712 270 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 SRP72O76094 671 aaKnown RBP13.71□□□□□ -0.21
POLR1B-209ENST00000448770 LTA4HP09960 611 aaKnown RBP13.71□□□□□ -0.21
POLR1B-209ENST00000448770 ETFBP38117 255 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 WNT3AP56704 352 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 CAPRIN1Q14444 709 aaKnown RBP13.71□□□□□ -0.21
POLR1B-209ENST00000448770 PSMD5Q16401 504 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 UNC50Q53HI1 259 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 HECTD2Q5U5R9 776 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 TWF2Q6IBS0 349 aaKnown RBP13.71□□□□□ -0.21
POLR1B-209ENST00000448770 ZBTB49Q6ZSB9 765 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 TFAP2CQ92754 450 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 HSPBAP1Q96EW2 488 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 RMND5BQ96G75 393 aaPredicted RBP13.71□□□□□ -0.21
POLR1B-209ENST00000448770 KCNA7Q96RP8 456 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 GAD1Q99259 594 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 GPATCH1Q9BRR8 931 aaKnown RBP13.71□□□□□ -0.21
POLR1B-209ENST00000448770 NOL6Q9H6R4 1146 aaKnown RBP13.71□□□□□ -0.21
POLR1B-209ENST00000448770 PNPLA3Q9NST1 481 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 DSEQ9UL01 958 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 MYRFQ9Y2G1 1151 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 BRCA2P51587 3418 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 TTC3P53804 2025 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 TPST1O60507 370 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 FOXD2O60548 495 aaPredicted RBP13.71□□□□□ -0.21
POLR1B-209ENST00000448770 ANXA9O76027 345 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 SIX3O95343 332 aaPredicted RBP13.71□□□□□ -0.21
POLR1B-209ENST00000448770 PEX11BO96011 259 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 F9P00740 461 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 DNAJB2P25686 324 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 AXLP30530 894 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 POLD2P49005 469 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 SH3BP2P78314 561 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 TIAL1Q01085 375 aaKnown RBP eCLIP13.71□□□□□ -0.21
POLR1B-209ENST00000448770 GRB7Q14451 532 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 FAM83EQ2M2I3 478 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 PPP4R4Q6NUP7 873 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 ERMP1Q7Z2K6 904 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 CBR4Q8N4T8 237 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 ANKFN1Q8N957 763 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 EXT2Q93063 718 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 PPWD1Q96BP3 646 aaKnown RBP13.71□□□□□ -0.21
POLR1B-209ENST00000448770 NSUN5Q96P11 429 aaKnown RBP13.71□□□□□ -0.21
POLR1B-209ENST00000448770 FSD1LQ9BXM9 530 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 AKTIPQ9H8T0 292 aa13.71□□□□□ -0.21
POLR1B-209ENST00000448770 MRM3Q9HC36 420 aaKnown RBP13.71□□□□□ -0.21
POLR1B-209ENST00000448770 CSNK1G1Q9HCP0 422 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms