RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 DPYSL2Q16555 572 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 ZNF805Q5CZA5 627 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 MANEALQ5VSG8 457 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 ZCCHC8Q6NZY4 707 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 MFSD7Q6UXD7 560 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 KATNAL2Q8IYT4 538 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 SLC22A18ASQ8N1D0 253 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 NETO2Q8NC67 525 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 KCTD6Q8NC69 237 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 ZNF248Q8NDW4 579 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 BTN2A2Q8WVV5 523 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 MAGEH1Q9H213 219 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 CWC15Q9P013 229 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 RP1P56715 2156 aa13.9□□□□□ -0.18
PDLIM2-213ENST00000448520 C16orf96A6NNT2 1141 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 MIF4GDA9UHW6 222 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 EEF2KO00418 725 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 NEMP1O14524 444 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 DXOO77932 396 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 KRT10P13645 584 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 NME1P15531 152 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 RHOQP17081 205 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 AMPD1P23109 780 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 IL4RP24394 825 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 AIF1P55008 147 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 RWDD2BP57060 319 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 TPI1P60174 286 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 ERVPABLB-1P60509 514 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 RAD51Q06609 339 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 PTK2BQ14289 1009 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 ZNF542PQ5EBM4 170 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 RWDD4Q6NW29 188 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 SPOCD1Q6ZMY3 1216 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 PARGQ86W56 976 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 CCDC50Q8IVM0 306 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 UBL4BQ8N7F7 174 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 DENND6BQ8NEG7 585 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 FAM71BQ8TC56 605 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 ARHGEF2Q92974 986 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 FCRL3Q96P31 734 aaPredicted RBP13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 CSPG4P5Q96PW8 444 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 KLF6Q99612 283 aaPredicted RBP13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 OSBPL1AQ9BXW6 950 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 ZDHHC6Q9H6R6 413 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 TMEM248Q9NWD8 314 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 DDX56Q9NY93 547 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 FCF1Q9Y324 198 aaKnown RBP13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 JRKLQ9Y4A0 524 aa13.89□□□□□ -0.19
PDLIM2-213ENST00000448520 ZSCAN5CA6NGD5 496 aaPredicted RBP13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 IGLON5A6NGN9 336 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 H3BRJ5 948 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 TOR1BO14657 336 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 ZNF185O15231 689 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 RAD51BO15315 384 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 LZTS3O60299 673 aaPredicted RBP13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 USP12O75317 370 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 CD160O95971 181 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 GSRP00390 522 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 JUNDP17535 347 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 CDKN2BP42772 138 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 PCBP4P57723 403 aaKnown RBP13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 TLE3Q04726 772 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 ADCY2Q08462 1091 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 MYLK3Q32MK0 819 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 BROXQ5VW32 411 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 KAZNQ674X7 775 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 RFX8Q6ZV50 586 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 PARS2Q7L3T8 475 aaKnown RBP13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 PSTKQ8IV42 348 aaKnown RBP13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 SPACA3Q8IXA5 215 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 RYBPQ8N488 228 aaPredicted RBP13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 OR2AP1Q8NGE2 309 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 IFI44Q8TCB0 444 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 MAPK15Q8TD08 544 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 COG1Q8WTW3 980 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 ZNF592Q92610 1267 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 GLMNQ92990 594 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 TBC1D31Q96DN5 1066 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 LGMNQ99538 433 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 IL12RB2Q99665 862 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 NAPGQ99747 312 aaPredicted RBP13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 HEMGNQ9BXL5 484 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 POLR1BQ9H9Y6 1135 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 ETNK2Q9NVF9 386 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 SMARCAL1Q9NZC9 954 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 PCDHB1Q9Y5F3 818 aa13.88□□□□□ -0.19
PDLIM2-213ENST00000448520 LY6G6EA0A0G2JKS1 128 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 TCRBV7S2A1N4TA0A589 114 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 EME2A4GXA9 379 aaPredicted RBP13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 CAPN8A6NHC0 703 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 AQP9O43315 295 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 KDELR3O43731 214 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 RAMP2O60895 175 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 CSO75390 466 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 NEBLO76041 1014 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 ZRANB2O95218 330 aaKnown RBP eCLIP13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 EPHB2P29323 1055 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 CASQ1P31415 396 aa13.87□□□□□ -0.19
PDLIM2-213ENST00000448520 ACVRL1P37023 503 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms