RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ODC1P11926 461 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 GLRBP48167 497 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 PDE6CP51160 858 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 MFAP3P55082 362 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 LILRA4P59901 499 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 GPR85P60893 370 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 MC1RQ01726 317 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 C1orf61Q13536 156 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 CTTNQ14247 550 aaKnown RBP5.13□□□□□ -1.59
SDCBP-205ENST00000447267 FNDC3BQ53EP0 1204 aaKnown RBP5.13□□□□□ -1.59
SDCBP-205ENST00000447267 WSCD1Q658N2 575 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 VASNQ6EMK4 673 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 IQCHQ86VS3 1027 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 DCP1BQ8IZD4 617 aaKnown RBP5.13□□□□□ -1.59
SDCBP-205ENST00000447267 THEM5Q8N1Q8 247 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 STPG3Q8N7X2 389 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 ST6GALNAC3Q8NDV1 305 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 CTCFLQ8NI51 663 aaPredicted RBP5.13□□□□□ -1.59
SDCBP-205ENST00000447267 LMX1AQ8TE12 382 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 UCMAQ8WVF2 138 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 KLK6Q92876 244 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 FEM1CQ96JP0 617 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 TAAR9Q96RI9 348 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 HAPLN3Q96S86 360 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 SCAND2PQ9GZW5 306 aaPredicted RBP5.13□□□□□ -1.59
SDCBP-205ENST00000447267 LRRN3Q9H3W5 708 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 POLD4Q9HCU8 107 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 WDR35Q9P2L0 1181 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 FBXO10Q9UK96 956 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 POLHQ9Y253 713 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 ZDHHC9Q9Y397 364 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 COPG1Q9Y678 874 aaKnown RBP5.13□□□□□ -1.59
SDCBP-205ENST00000447267 RNF215Q9Y6U7 377 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 TTC41PQ6P2S7 1318 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 MXRA5Q9NR99 2828 aa5.13□□□□□ -1.59
SDCBP-205ENST00000447267 POLEQ07864 2286 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.12□□□□□ -1.59
SDCBP-205ENST00000447267 NPEPPSL1A6NEC2 478 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 ZNF839A8K0R7 811 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 NPC1O15118 1278 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 COCHO43405 550 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 LATO43561 262 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 LRCH4O75427 683 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 HARSP12081 509 aaKnown RBP5.12□□□□□ -1.59
SDCBP-205ENST00000447267 NFKBIAP25963 317 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 CSF2RBP32927 897 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 CIITAP33076 1130 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 CLDN2P57739 230 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 CSNK1G2P78368 415 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 ZBTB16Q05516 673 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 OVGP1Q12889 678 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 SEMA5AQ13591 1074 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 CRB2Q5IJ48 1285 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 ZNF776Q68DI1 518 aaPredicted RBP5.12□□□□□ -1.59
SDCBP-205ENST00000447267 CDCA2Q69YH5 1023 aaPredicted RBP5.12□□□□□ -1.59
SDCBP-205ENST00000447267 C16orf47Q6ZP98 133 aaPredicted RBP5.12□□□□□ -1.59
SDCBP-205ENST00000447267 Q6ZUG5 572 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 USP30Q70CQ3 517 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 OTUD6AQ7L8S5 288 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 KDELC2Q7Z4H8 507 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 PRPF39Q86UA1 669 aaKnown RBP5.12□□□□□ -1.59
SDCBP-205ENST00000447267 DDX42Q86XP3 938 aaKnown RBP eCLIP5.12□□□□□ -1.59
SDCBP-205ENST00000447267 ZBTB8OSQ8IWT0 167 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 TRIM48Q8IWZ4 208 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 CIARTQ8N365 385 aaPredicted RBP5.12□□□□□ -1.59
SDCBP-205ENST00000447267 UBR7Q8N806 425 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.12□□□□□ -1.59
SDCBP-205ENST00000447267 NAT6Q93015 286 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 ART4Q93070 314 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 PNPLA2Q96AD5 504 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 IL12RB2Q99665 862 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 OMDQ99983 421 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 KIFC3Q9BVG8 833 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 TARS2Q9BW92 718 aaKnown RBP5.12□□□□□ -1.59
SDCBP-205ENST00000447267 KLC2Q9H0B6 622 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 CCDC113Q9H0I3 377 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 MLXIPLQ9NP71 852 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 FZD3Q9NPG1 666 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 SIRPGQ9P1W8 387 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 PILRAQ9UKJ1 303 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 PCDHA12Q9UN75 941 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 TSC22D4Q9Y3Q8 395 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 ANAPC1Q9H1A4 1944 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 RP1P56715 2156 aa5.12□□□□□ -1.59
SDCBP-205ENST00000447267 VPS13CQ709C8 3753 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 A0A1B0GUH1 482 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 FAM90A27PA6NNH2 459 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 CYB561D2O14569 222 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 SLC31A1O15431 190 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 PHF1O43189 567 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-205ENST00000447267 AQP9O43315 295 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 DPM1O60762 260 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 CRLF1O75462 422 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 GCATO75600 419 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 ZNF888P0CJ79 500 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-205ENST00000447267 PRLRP16471 622 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 ACAT1P24752 427 aaKnown RBP5.11□□□□□ -1.59
SDCBP-205ENST00000447267 LRPAP1P30533 357 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 MCM5P33992 734 aa5.11□□□□□ -1.59
SDCBP-205ENST00000447267 ADPRHP54922 357 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms