RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 NPNTQ6UXI9 565 aa14.82□□□□□ -0.04
USE1-202ENST00000445667 RFX6Q8HWS3 928 aa14.82□□□□□ -0.04
USE1-202ENST00000445667 RBFAQ8N0V3 343 aa14.82□□□□□ -0.04
USE1-202ENST00000445667 PLA2G15Q8NCC3 412 aa14.82□□□□□ -0.04
USE1-202ENST00000445667 OR4C6Q8NH72 309 aa14.82□□□□□ -0.04
USE1-202ENST00000445667 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.82□□□□□ -0.04
USE1-202ENST00000445667 LGMNQ99538 433 aa14.82□□□□□ -0.04
USE1-202ENST00000445667 APOOQ9BUR5 198 aa14.82□□□□□ -0.04
USE1-202ENST00000445667 POLR1EQ9GZS1 481 aaKnown RBP14.82□□□□□ -0.04
USE1-202ENST00000445667 PHTF1Q9UMS5 762 aa14.82□□□□□ -0.04
USE1-202ENST00000445667 TTLL3Q9Y4R7 772 aa14.82□□□□□ -0.04
USE1-202ENST00000445667 OR1A2Q9Y585 309 aa14.82□□□□□ -0.04
USE1-202ENST00000445667 RAI2Q9Y5P3 530 aa14.82□□□□□ -0.04
USE1-202ENST00000445667 EPN1Q9Y6I3 576 aaPredicted RBP14.82□□□□□ -0.04
USE1-202ENST00000445667 COL5A1P20908 1838 aaPredicted RBP14.82□□□□□ -0.04
USE1-202ENST00000445667 A0A0U1RQS6 177 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 FAM149AA5PLN7 773 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 RCCD1A6NED2 376 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 ZNF487B1APH4 448 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 KCNK1O00180 336 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 SCAMP1O15126 338 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 RFPL3O75679 317 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 PGLSO95336 258 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 JCHAINP01591 159 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 PROS1P07225 676 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 PDHA1P08559 390 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 CTPS1P17812 591 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 ACADVLP49748 655 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 HADHBP55084 474 aaKnown RBP14.81□□□□□ -0.04
USE1-202ENST00000445667 DYNLT1P63172 113 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 NIPAL4Q0D2K0 466 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 C1orf61Q13536 156 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 ACOX1Q15067 660 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 AGERQ15109 404 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 ST3GAL2Q16842 350 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 HS1BP3Q53T59 392 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 ODF2Q5BJF6 829 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 ARMC12Q5T9G4 340 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 FAXCQ5TGI0 409 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 DENND2CQ68D51 928 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 SLC9A4Q6AI14 798 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 CCNI2Q6ZMN8 369 aaPredicted RBP14.81□□□□□ -0.04
USE1-202ENST00000445667 NYAP1Q6ZVC0 841 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 B4GALNT4Q76KP1 1039 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 TMPRSS7Q7RTY8 843 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 TMTC1Q8IUR5 882 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 CCDC13Q8IYE1 715 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 ZNF548Q8NEK5 533 aaPredicted RBP14.81□□□□□ -0.04
USE1-202ENST00000445667 LMX1AQ8TE12 382 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 PIH1D2Q8WWB5 315 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 SPOCK2Q92563 424 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 FATE1Q969F0 183 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 HDAC11Q96DB2 347 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 SMIM14Q96QK8 99 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 DDX56Q9NY93 547 aaKnown RBP14.81□□□□□ -0.04
USE1-202ENST00000445667 SALL4Q9UJQ4 1053 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 LRRK1Q38SD2 2015 aa14.81□□□□□ -0.04
USE1-202ENST00000445667 TDRD6O60522 2096 aaKnown RBP14.81□□□□□ -0.04
USE1-202ENST00000445667 A0A1W2PQ67 120 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 NEMP2A6NFY4 417 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 H3BM21 787 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 K7ESM1 405 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 TOR1BO14657 336 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 APOL1O14791 398 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 AQP9O43315 295 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 GCATO75600 419 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 NDUFA10O95299 355 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 HLA-DQB2P05538 268 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 FECHP22830 423 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 VIPR1P32241 457 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 PEX5P50542 639 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 PPIDQ08752 370 aaKnown RBP14.8□□□□□ -0.04
USE1-202ENST00000445667 MTM1Q13496 603 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 CNGA3Q16281 694 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 PRRT3Q5FWE3 981 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 ENPP7Q6UWV6 458 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 RAD9BQ6WBX8 426 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 MACC1Q6ZN28 852 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 VSIG1Q86XK7 387 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 PHACTR4Q8IZ21 702 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 PELI3Q8N2H9 469 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 ARRDC2Q8TBH0 407 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 TSACCQ96A04 125 aaPredicted RBP14.8□□□□□ -0.04
USE1-202ENST00000445667 APOLD1Q96LR9 279 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 ZNF830Q96NB3 372 aaPredicted RBP14.8□□□□□ -0.04
USE1-202ENST00000445667 ANP32EQ9BTT0 268 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 NLGN3Q9NZ94 848 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 APOBEC3BQ9UH17 382 aaKnown RBP14.8□□□□□ -0.04
USE1-202ENST00000445667 PCDHGA1Q9Y5H4 931 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 FRYQ5TBA9 3013 aa14.8□□□□□ -0.04
USE1-202ENST00000445667 A0A0A6YYK5 440 aaPredicted RBP14.79□□□□□ -0.04
USE1-202ENST00000445667 NPIPB15A6NHN6 443 aaPredicted RBP14.79□□□□□ -0.04
USE1-202ENST00000445667 FZD6O60353 706 aa14.79□□□□□ -0.04
USE1-202ENST00000445667 HEXIM1O94992 359 aaKnown RBP14.79□□□□□ -0.04
USE1-202ENST00000445667 C1SP09871 688 aa14.79□□□□□ -0.04
USE1-202ENST00000445667 ALPIP09923 528 aa14.79□□□□□ -0.04
USE1-202ENST00000445667 ALPPL2P10696 532 aa14.79□□□□□ -0.04
USE1-202ENST00000445667 CYP2A6P11509 494 aaPredicted RBP14.79□□□□□ -0.04
USE1-202ENST00000445667 KRT10P13645 584 aa14.79□□□□□ -0.04
USE1-202ENST00000445667 ZFXP17010 805 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms