RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 HERC3Q15034 1050 aa16.71■□□□□ 0.26
TCOF1-206ENST00000445265 TAC4Q86UU9 113 aa16.71■□□□□ 0.26
TCOF1-206ENST00000445265 OR2T34Q8NGX1 318 aa16.71■□□□□ 0.26
TCOF1-206ENST00000445265 OR2T3Q8NH03 318 aa16.71■□□□□ 0.26
TCOF1-206ENST00000445265 KLHL5Q96PQ7 755 aa16.71■□□□□ 0.26
TCOF1-206ENST00000445265 ZMYM5Q9UJ78 669 aa16.71■□□□□ 0.26
TCOF1-206ENST00000445265 HS6ST1O60243 411 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 TSPAN3O60637 253 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 HCAR3P49019 387 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 TAS2R39P59534 338 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 SLC9B1Q4ZJI4 515 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 FAM47BQ8NA70 645 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 MRPS31Q92665 395 aaKnown RBP16.7■□□□□ 0.26
TCOF1-206ENST00000445265 NOL11Q9H8H0 719 aaKnown RBP16.7■□□□□ 0.26
TCOF1-206ENST00000445265 PPM1HQ9ULR3 514 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 ZSCAN9O15535 394 aaPredicted RBP16.7■□□□□ 0.26
TCOF1-206ENST00000445265 HALP42357 657 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 TUFMP49411 452 aaKnown RBP16.7■□□□□ 0.26
TCOF1-206ENST00000445265 ZNF252P-AS1Q0IIN9 211 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 ADGRE1Q14246 886 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 MBLAC2Q68D91 279 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 KIAA0930Q6ICG6 404 aaPredicted RBP16.7■□□□□ 0.26
TCOF1-206ENST00000445265 TRIM69Q86WT6 500 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 TMEM132CQ8N3T6 1108 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 PPP3R2Q96LZ3 170 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 PANX3Q96QZ0 392 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 AGO3Q9H9G7 860 aaKnown RBP16.7■□□□□ 0.26
TCOF1-206ENST00000445265 INVSQ9Y283 1065 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 TPRKBQ9Y3C4 175 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 C1orf232A0A0U1RR37 186 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 TREHO43280 583 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 MT-CYBP00156 380 aaPredicted RBP16.7■□□□□ 0.26
TCOF1-206ENST00000445265 CKMP06732 381 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 DGKAP23743 735 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 S100A3P33764 101 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 ARMC12Q5T9G4 340 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 RAB42Q8N4Z0 105 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 SEPT8Q92599 483 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 LPIN3Q9BQK8 851 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 EGFL7Q9UHF1 273 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 TTLL13PA6NNM8 815 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 MSI1O43347 362 aaKnown RBP16.7■□□□□ 0.26
TCOF1-206ENST00000445265 TIPRLO75663 272 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 LINC00032P0C843 101 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 RALGDSQ12967 914 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 BFSP2Q13515 415 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 DPY19L2P1Q6NXN4 242 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 PATL1Q86TB9 770 aaKnown RBP16.7■□□□□ 0.26
TCOF1-206ENST00000445265 TBC1D21Q8IYX1 336 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 RORBQ92753 470 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 OTUB1Q96FW1 271 aaPredicted RBP16.7■□□□□ 0.26
TCOF1-206ENST00000445265 CIB1Q99828 191 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 SENP6Q9GZR1 1112 aaPredicted RBP16.7■□□□□ 0.26
TCOF1-206ENST00000445265 POLR1BQ9H9Y6 1135 aa16.7■□□□□ 0.26
TCOF1-206ENST00000445265 EXOSC4Q9NPD3 245 aaKnown RBP16.7■□□□□ 0.26
TCOF1-206ENST00000445265 ZMYND8Q9ULU4 1186 aaPredicted RBP16.7■□□□□ 0.26
TCOF1-206ENST00000445265 MYBPHLA2RUH7 354 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 H3BNX3 289 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 RHOQP17081 205 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 CCNFP41002 786 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 ADAMTSL2Q86TH1 951 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 SVOPQ8N4V2 548 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 CDYL2Q8N8U2 506 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 ACBD6Q9BR61 282 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 ATXN10Q9UBB4 475 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 SQORQ9Y6N5 450 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 CHRNGP07510 517 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 PIRTP0C851 137 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 SMPD1P17405 629 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 ITGAXP20702 1163 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 LPOP22079 712 aaPredicted RBP16.69■□□□□ 0.26
TCOF1-206ENST00000445265 FAM110CQ1W6H9 321 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 EML3Q32P44 896 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 MTX3Q5HYI7 312 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 SYPL2Q5VXT5 272 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 DENND6AQ8IWF6 608 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 HEXDCQ8WVB3 486 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 KRT8P05787 483 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 WNT7BP56706 349 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 BROXQ5VW32 411 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 SPATA19Q7Z5L4 167 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 FCRL5Q96RD9 977 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 APOL4Q9BPW4 351 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 PLGRKTQ9HBL7 147 aa16.69■□□□□ 0.26
TCOF1-206ENST00000445265 MGAT4DA6NG13 374 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 E9PAM4 449 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 NFKBIEO00221 500 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 SPTLC1O15269 473 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 SLC22A3O75751 556 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 FAM163BP0C2L3 166 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 MZF1P28698 734 aaPredicted RBP16.68■□□□□ 0.26
TCOF1-206ENST00000445265 PAFAH1B3Q15102 231 aaKnown RBP16.68■□□□□ 0.26
TCOF1-206ENST00000445265 C6orf52Q5T4I8 152 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 KCTD13Q8WZ19 329 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 BTN2A3PQ96KV6 586 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 C1orf50Q9BV19 199 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 MUC13Q9H3R2 512 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 PIGVQ9NUD9 493 aa16.68■□□□□ 0.26
TCOF1-206ENST00000445265 DDX28Q9NUL7 540 aaKnown RBP16.68■□□□□ 0.26
TCOF1-206ENST00000445265 CPSF4O95639 269 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms