RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 GOLGA6CA6NDK9 693 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 GOLGA6BA6NDN3 693 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 FAM187AA6NFU0 413 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 USP12O75317 370 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 RNASEH2AO75792 299 aaKnown RBP17.33■□□□□ 0.36
LIME1-202ENST00000444951 ADH1BP00325 375 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 AGTP01019 485 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 PRKCGP05129 697 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 APRTP07741 180 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 PDHA1P08559 390 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 GOLGA6DP0CG33 693 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 CA4P22748 312 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 XPAP23025 273 aaPredicted RBP17.33■□□□□ 0.36
LIME1-202ENST00000444951 IRX4P78413 519 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 MPP3Q13368 585 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 GALNT3Q14435 633 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 ZNF805Q5CZA5 627 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 ARMC12Q5T9G4 340 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 KDELC1Q6UW63 502 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 FAM124AQ86V42 546 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 C11orf74Q86VG3 221 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 HDDC3Q8N4P3 179 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 LPCAT1Q8NF37 534 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 PIGKQ92643 395 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 VOPP1Q96AW1 172 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 LRRC45Q96CN5 670 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 PPP1R16AQ96I34 528 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 LRIG1Q96JA1 1093 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 ZNF641Q96N77 438 aaPredicted RBP17.33■□□□□ 0.36
LIME1-202ENST00000444951 OMDQ99983 421 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 TDRD1Q9BXT4 1180 aaKnown RBP17.33■□□□□ 0.36
LIME1-202ENST00000444951 TMEM74BQ9NUR3 256 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 GOLGA6AQ9NYA3 693 aa17.33■□□□□ 0.36
LIME1-202ENST00000444951 ANKRD36A6QL64 1941 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 A0A1W2PP55 124 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 C16orf96A6NNT2 1141 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 EFCAB8A8MWE9 144 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 KHNYNO15037 678 aaKnown RBP17.32■□□□□ 0.36
LIME1-202ENST00000444951 SOCS5O75159 536 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 CPP00450 1065 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 EPHB1P54762 984 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 SEMG2Q02383 582 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 CDK18Q07002 472 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 CNTN1Q12860 1018 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 SEMA5AQ13591 1074 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 ST3GAL2Q16842 350 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 TEX35Q5T0J7 233 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.32■□□□□ 0.36
LIME1-202ENST00000444951 PARS2Q7L3T8 475 aaKnown RBP17.32■□□□□ 0.36
LIME1-202ENST00000444951 ZSWIM9Q86XI8 627 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 AADATQ8N5Z0 425 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 CCHCR1Q8TD31 782 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 TADA1Q96BN2 335 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 MRGPRX2Q96LB1 330 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 PPP1R2P1Q96PQ5 205 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 TBL1YQ9BQ87 522 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 PABPC3Q9H361 631 aaKnown RBP17.32■□□□□ 0.36
LIME1-202ENST00000444951 CD93Q9NPY3 652 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 PIH1D1Q9NWS0 290 aaKnown RBP17.32■□□□□ 0.36
LIME1-202ENST00000444951 ANGPTL2Q9UKU9 493 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 SNX24Q9Y343 169 aa17.32■□□□□ 0.36
LIME1-202ENST00000444951 ADAMTS9Q9P2N4 1935 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 TRAFD1O14545 582 aaPredicted RBP17.31■□□□□ 0.36
LIME1-202ENST00000444951 RIOK3O14730 519 aaKnown RBP17.31■□□□□ 0.36
LIME1-202ENST00000444951 PSMD3O43242 534 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 PGLSO95336 258 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 SLU7O95391 586 aaKnown RBP17.31■□□□□ 0.36
LIME1-202ENST00000444951 RHOXF2BP0C7M4 288 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 CTPS1P17812 591 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 ITIH2P19823 946 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 C5AR1P21730 350 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 ITGB7P26010 798 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 CHRNA4P43681 627 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 NOVA1P51513 510 aaKnown RBP17.31■□□□□ 0.36
LIME1-202ENST00000444951 PTPRRQ15256 657 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 TTC31Q49AM3 519 aaPredicted RBP17.31■□□□□ 0.36
LIME1-202ENST00000444951 IZUMO3Q5VZ72 239 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 CCDC70Q6NSX1 233 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 FBXL19Q6PCT2 694 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 PPP1R21Q6ZMI0 780 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 LPCAT2Q7L5N7 544 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 TTC7BQ86TV6 843 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 DEFB119Q8N690 84 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 SMIM14Q96QK8 99 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 RHOXF2Q9BQY4 288 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 ERP44Q9BS26 406 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 LRRC40Q9H9A6 602 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 FSCN3Q9NQT6 498 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 FBXL12Q9NXK8 326 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 SERGEFQ9UGK8 458 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 UTP11Q9Y3A2 253 aaKnown RBP17.31■□□□□ 0.36
LIME1-202ENST00000444951 CACNA1EQ15878 2313 aa17.31■□□□□ 0.36
LIME1-202ENST00000444951 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.3■□□□□ 0.36
LIME1-202ENST00000444951 TCRBV7S3A2A0A539 114 aa17.3■□□□□ 0.36
LIME1-202ENST00000444951 A8MX80 341 aa17.3■□□□□ 0.36
LIME1-202ENST00000444951 GOLGA8MH3BSY2 632 aa17.3■□□□□ 0.36
LIME1-202ENST00000444951 HTRA2O43464 458 aaPredicted RBP17.3■□□□□ 0.36
LIME1-202ENST00000444951 HEXIM1O94992 359 aaKnown RBP17.3■□□□□ 0.36
LIME1-202ENST00000444951 AP2A1O95782 977 aa17.3■□□□□ 0.36
LIME1-202ENST00000444951 PRLP01236 227 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms