RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 NLGN3Q9NZ94 848 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 KLF15Q9UIH9 416 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 TFR2Q9UP52 801 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 PCDHA13Q9Y5I0 950 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 AK5Q9Y6K8 562 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 ANKRD36A6QL64 1941 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 K7ESM1 405 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 NEBLO76041 1014 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 TM7SF2O76062 418 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 IPO7O95373 1038 aaKnown RBP14.1□□□□□ -0.15
TREX1-202ENST00000444177 PRKCGP05129 697 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 ALPPL2P10696 532 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 MYF5P13349 255 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 COMTP21964 271 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 HSPA9P38646 679 aaKnown RBP14.1□□□□□ -0.15
TREX1-202ENST00000444177 GARSP41250 739 aaKnown RBP14.1□□□□□ -0.15
TREX1-202ENST00000444177 MMP13P45452 471 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 SUOXP51687 545 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 MAXP61244 160 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 GBE1Q04446 702 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 NSUN2Q08J23 767 aaKnown RBP eCLIP14.1□□□□□ -0.15
TREX1-202ENST00000444177 GSE1Q14687 1217 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 RTP5Q14D33 572 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 TCEAL1Q15170 157 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 UGP2Q16851 508 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 MARC1Q5VT66 337 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 TIGD7Q6NT04 549 aaPredicted RBP14.1□□□□□ -0.15
TREX1-202ENST00000444177 PDZD3Q86UT5 571 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 PARGQ86W56 976 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 RHOT1Q8IXI2 618 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 PGBD5Q8N414 524 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 PQLC3Q8N755 202 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 DCBLD1Q8N8Z6 715 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 FAM181AQ8N9Y4 354 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 DENND6BQ8NEG7 585 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 HCAR2Q8TDS4 363 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 ANP32BQ92688 251 aaKnown RBP14.1□□□□□ -0.15
TREX1-202ENST00000444177 APOLD1Q96LR9 279 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 ZNF830Q96NB3 372 aaPredicted RBP14.1□□□□□ -0.15
TREX1-202ENST00000444177 BAG1Q99933 345 aaPredicted RBP14.1□□□□□ -0.15
TREX1-202ENST00000444177 MGME1Q9BQP7 344 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 DUSP23Q9BVJ7 150 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 PCDH12Q9NPG4 1184 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 CLCA2Q9UQC9 943 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 ATP8A1Q9Y2Q0 1164 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 TTLL3Q9Y4R7 772 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 CSNK1G3Q9Y6M4 447 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 SHROOM3Q8TF72 1996 aa14.1□□□□□ -0.15
TREX1-202ENST00000444177 MYLKQ15746 1914 aa14.09□□□□□ -0.15
TREX1-202ENST00000444177 A0A087WV48 116 aa14.09□□□□□ -0.15
TREX1-202ENST00000444177 LY6G6EA0A0G2JKS1 128 aa14.09□□□□□ -0.15
TREX1-202ENST00000444177 NDUFA10O95299 355 aa14.09□□□□□ -0.15
TREX1-202ENST00000444177 MT-CO3P00414 261 aa14.09□□□□□ -0.15
TREX1-202ENST00000444177 HOXB3P14651 431 aaPredicted RBP14.09□□□□□ -0.15
TREX1-202ENST00000444177 JUNDP17535 347 aa14.09□□□□□ -0.15
TREX1-202ENST00000444177 SEMG2Q02383 582 aa14.09□□□□□ -0.15
TREX1-202ENST00000444177 EIF2B5Q13144 721 aaKnown RBP14.09□□□□□ -0.15
TREX1-202ENST00000444177 IFI16Q16666 785 aaKnown RBP14.09□□□□□ -0.15
TREX1-202ENST00000444177 TMEM52BQ4KMG9 183 aa14.09□□□□□ -0.15
TREX1-202ENST00000444177 LRRC49Q8IUZ0 686 aa14.09□□□□□ -0.15
TREX1-202ENST00000444177 TMEM139Q8IV31 216 aa14.09□□□□□ -0.15
TREX1-202ENST00000444177 ZNF548Q8NEK5 533 aaPredicted RBP14.09□□□□□ -0.15
TREX1-202ENST00000444177 PDCD6IPQ8WUM4 868 aaKnown RBP14.09□□□□□ -0.15
TREX1-202ENST00000444177 RNF157Q96PX1 679 aa14.09□□□□□ -0.15
TREX1-202ENST00000444177 NUDCD1Q96RS6 583 aa14.09□□□□□ -0.15
TREX1-202ENST00000444177 C1QTNF7Q9BXJ2 289 aa14.09□□□□□ -0.15
TREX1-202ENST00000444177 MAK16Q9BXY0 300 aaKnown RBP14.09□□□□□ -0.15
TREX1-202ENST00000444177 GOLPH3Q9H4A6 298 aa14.09□□□□□ -0.15
TREX1-202ENST00000444177 NT5MQ9NPB1 228 aa14.09□□□□□ -0.15
TREX1-202ENST00000444177 DDX56Q9NY93 547 aaKnown RBP14.09□□□□□ -0.15
TREX1-202ENST00000444177 COQ6Q9Y2Z9 468 aa14.09□□□□□ -0.15
TREX1-202ENST00000444177 U3KQA8 63 aa14.09□□□□□ -0.15
TREX1-202ENST00000444177 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.08□□□□□ -0.16
TREX1-202ENST00000444177 H3BM21 787 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 RIOK3O14730 519 aaKnown RBP14.08□□□□□ -0.16
TREX1-202ENST00000444177 APOL1O14791 398 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 AQP9O43315 295 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 OPA1O60313 960 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 CPP00450 1065 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 C6P13671 934 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 CR2P20023 1033 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 MX2P20592 715 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 IGFALSP35858 605 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 MMP12P39900 470 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 DUSP3P51452 185 aaPredicted RBP14.08□□□□□ -0.16
TREX1-202ENST00000444177 THOP1P52888 689 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 HADHBP55084 474 aaKnown RBP14.08□□□□□ -0.16
TREX1-202ENST00000444177 ITKQ08881 620 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 PTK2BQ14289 1009 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 LRRC38Q5VT99 294 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 RAD9BQ6WBX8 426 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 RFX6Q8HWS3 928 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 CCNYQ8ND76 341 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 CCDC112Q8NEF3 446 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 LMX1AQ8TE12 382 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 LRRN4Q8WUT4 740 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 RNF25Q96BH1 459 aaPredicted RBP14.08□□□□□ -0.16
TREX1-202ENST00000444177 ECHDC3Q96DC8 303 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 NSMCE3Q96MG7 304 aa14.08□□□□□ -0.16
TREX1-202ENST00000444177 POLR1EQ9GZS1 481 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms