RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 PRKCGP05129 697 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 HNF1BP35680 557 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 FNTBP49356 437 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 ITGA8P53708 1063 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 USP39Q53GS9 565 aaKnown RBP15.85■□□□□ 0.13
USP40-206ENST00000443711 HIBCHQ6NVY1 386 aaPredicted RBP15.85■□□□□ 0.13
USP40-206ENST00000443711 LRRC8BQ6P9F7 803 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 WDR5BQ86VZ2 330 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 OR14C36Q8NHC7 312 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 MCCC1Q96RQ3 725 aaPredicted RBP15.85■□□□□ 0.13
USP40-206ENST00000443711 HINFPQ9BQA5 517 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 FRMD8Q9BZ67 464 aaPredicted RBP15.85■□□□□ 0.13
USP40-206ENST00000443711 BTBD1Q9H0C5 482 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 KDM4CQ9H3R0 1056 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 MAGEE1Q9HCI5 957 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 EPB41L5Q9HCM4 733 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 XAB2Q9HCS7 855 aaKnown RBP15.85■□□□□ 0.13
USP40-206ENST00000443711 CASS4Q9NQ75 786 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 FAM114A2Q9NRY5 505 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 HACD3Q9P035 362 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 DMGDHQ9UI17 866 aaKnown RBP15.85■□□□□ 0.13
USP40-206ENST00000443711 SHOC2Q9UQ13 582 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 FADS3Q9Y5Q0 445 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 PLXND1Q9Y4D7 1925 aa15.85■□□□□ 0.13
USP40-206ENST00000443711 EML5Q05BV3 1969 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 LRRC72A6NJI9 287 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 TSPAN6O43657 245 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 PLRG1O43660 514 aaKnown RBP15.84■□□□□ 0.13
USP40-206ENST00000443711 TMEM63AO94886 807 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 ALPIP09923 528 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 RHOXF2BP0C7M4 288 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 MLNP12872 115 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 CD6P30203 668 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 VIPR1P32241 457 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 GRIA1P42261 906 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 NPY2RP49146 381 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 TAS2R38P59533 333 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 CAV1Q03135 178 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 DMWDQ09019 674 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 ZNF528Q3MIS6 628 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 TMEM52BQ4KMG9 183 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 LRRC73Q5JTD7 316 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 DPPA4Q7L190 304 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 LONP2Q86WA8 852 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 RLN3Q8WXF3 142 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 SEC14L1Q92503 715 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 SPACA7Q96KW9 195 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 LYSMD1Q96S90 227 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 RHOXF2Q9BQY4 288 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 PREBQ9HCU5 417 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 CD93Q9NPY3 652 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 WSB2Q9NYS7 404 aaPredicted RBP15.84■□□□□ 0.13
USP40-206ENST00000443711 GRHL1Q9NZI5 618 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 B4GALT6Q9UBX8 382 aa15.84■□□□□ 0.13
USP40-206ENST00000443711 TBC1D3DA0A087WVF3 549 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 TBC1D3IA0A087WXS9 549 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 TBC1D3EA0A087X179 549 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 TBC1D3KA0A087X1G2 549 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 IGHV1OR15-9A0A0B4J2B8 117 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 TBC1D3FA6NER0 549 aaPredicted RBP15.83■□□□□ 0.12
USP40-206ENST00000443711 NPIPB15A6NHN6 443 aaPredicted RBP15.83■□□□□ 0.12
USP40-206ENST00000443711 TBC1D3LB9A6J9 549 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 BHMG1C9JSJ3 638 aaPredicted RBP15.83■□□□□ 0.12
USP40-206ENST00000443711 GOLGA8MH3BSY2 632 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 GALR2O43603 387 aaPredicted RBP15.83■□□□□ 0.12
USP40-206ENST00000443711 PCDH8O95206 1070 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 TBC1D3HP0C7X1 549 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 PIRTP0C851 137 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 TPH1P17752 444 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 ACSL1P33121 698 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 MMP12P39900 470 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 ADPRHP54922 357 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 ARHGEF7Q14155 803 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 ANGPT1Q15389 498 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 MAP7D1Q3KQU3 841 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 TBC1D3GQ6DHY5 549 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 TBC1D3CQ6IPX1 549 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 NEK5Q6P3R8 708 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 CRTC1Q6UUV9 634 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 SLC36A4Q6YBV0 504 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 IFT20Q8IY31 132 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 TBC1D3Q8IZP1 549 aaPredicted RBP15.83■□□□□ 0.12
USP40-206ENST00000443711 OR2T34Q8NGX1 318 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 BLOC1S5Q8TDH9 187 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 ART4Q93070 314 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 TOE1Q96GM8 510 aaKnown RBP15.83■□□□□ 0.12
USP40-206ENST00000443711 SMIM14Q96QK8 99 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 TRABDQ9H4I3 376 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 BFARQ9NZS9 450 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 ITM2BQ9Y287 266 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 TRPM6Q9BX84 2022 aa15.83■□□□□ 0.12
USP40-206ENST00000443711 ESYT3A0FGR9 886 aa15.82■□□□□ 0.12
USP40-206ENST00000443711 A8MX80 341 aa15.82■□□□□ 0.12
USP40-206ENST00000443711 H0Y858 1186 aa15.82■□□□□ 0.12
USP40-206ENST00000443711 SPINT1O43278 529 aa15.82■□□□□ 0.12
USP40-206ENST00000443711 NDUFS2O75306 463 aa15.82■□□□□ 0.12
USP40-206ENST00000443711 SEMA4FO95754 770 aa15.82■□□□□ 0.12
USP40-206ENST00000443711 ZNF30P17039 623 aa15.82■□□□□ 0.12
USP40-206ENST00000443711 PLTPP55058 493 aa15.82■□□□□ 0.12
USP40-206ENST00000443711 SEMG2Q02383 582 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms