RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 PIGNO95427 931 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 GJB6O95452 261 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 ELFN1P0C7U0 828 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 CD82P27701 267 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 LIG3P49916 1009 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 COPB1P53618 953 aaKnown RBP13.89□□□□□ -0.19
PTPRE-203ENST00000442830 AP1S1P61966 158 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 MYL5Q02045 173 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 UBXN1Q04323 297 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 BCL2L1Q07817 233 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 CYTH1Q15438 398 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 PPP1R15BQ5SWA1 713 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 ACAD10Q6JQN1 1059 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 FOXR1Q6PIV2 292 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 CRTC1Q6UUV9 634 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 PCSK4Q6UW60 755 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 RAB11FIP2Q7L804 512 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 SRLQ86TD4 932 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 MCOLN2Q8IZK6 566 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 LZTR1Q8N653 840 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 GPR156Q8NFN8 814 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 OR56A4Q8NGH8 313 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 TSACCQ96A04 125 aaPredicted RBP13.89□□□□□ -0.19
PTPRE-203ENST00000442830 LRRN3Q9H3W5 708 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 SP110Q9HB58 689 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 EPB41L5Q9HCM4 733 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 AP4E1Q9UPM8 1137 aa13.89□□□□□ -0.19
PTPRE-203ENST00000442830 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.88□□□□□ -0.19
PTPRE-203ENST00000442830 A0A1W2PNU3 283 aaPredicted RBP13.88□□□□□ -0.19
PTPRE-203ENST00000442830 LRRC10BA6NIK2 292 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 EEF2KO00418 725 aaKnown RBP13.88□□□□□ -0.19
PTPRE-203ENST00000442830 EPHB6O15197 1021 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 NVLO15381 856 aaKnown RBP13.88□□□□□ -0.19
PTPRE-203ENST00000442830 INSIG1O15503 277 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 PCCBP05166 539 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 RPLP0P05388 317 aaKnown RBP13.88□□□□□ -0.19
PTPRE-203ENST00000442830 JMJD7P0C870 316 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 ATP1A3P13637 1013 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 CDK11BP21127 795 aaKnown RBP13.88□□□□□ -0.19
PTPRE-203ENST00000442830 HSPA9P38646 679 aaKnown RBP13.88□□□□□ -0.19
PTPRE-203ENST00000442830 KLK7P49862 253 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 PDX1P52945 283 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 CLN3Q13286 438 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 ERMARDQ5T6L9 678 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 OGFOD3Q6PK18 319 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 SASS6Q6UVJ0 657 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 CLEC17AQ6ZS10 378 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 RBM43Q6ZSC3 357 aaKnown RBP13.88□□□□□ -0.19
PTPRE-203ENST00000442830 RD3Q7Z3Z2 195 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 CCNJLQ8IV13 435 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 BBS5Q8N3I7 341 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 FNIP1Q8TF40 1166 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 SPOCK2Q92563 424 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 ECHDC3Q96DC8 303 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 EXOC2Q96KP1 924 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 ZNF599Q96NL3 588 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 KLC2Q9H0B6 622 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 FANCLQ9NW38 375 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 SIRPGQ9P1W8 387 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 PNMA8BQ9ULN7 279 aaPredicted RBP13.88□□□□□ -0.19
PTPRE-203ENST00000442830 COQ6Q9Y2Z9 468 aa13.88□□□□□ -0.19
PTPRE-203ENST00000442830 SETXQ7Z333 2677 aaKnown RBP13.87□□□□□ -0.19
PTPRE-203ENST00000442830 B8ZZF3 427 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 NUDT21O43809 227 aaKnown RBP13.87□□□□□ -0.19
PTPRE-203ENST00000442830 LIPCP11150 499 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 SFTPCP11686 197 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 PSMA2P25787 234 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 UGT1A5P35504 534 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 TRIM23P36406 574 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 HCAR3P49019 387 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 RPL7AP62424 266 aaKnown RBP13.87□□□□□ -0.19
PTPRE-203ENST00000442830 IL10RBQ08334 325 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 ARHGEF7Q14155 803 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 STX1AQ16623 288 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 ZSCAN23Q3MJ62 389 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 C14orf28Q4W4Y0 310 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 RALGPS1Q5JS13 557 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 CERCAMQ5T4B2 595 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 DPPA4Q7L190 304 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 TAF8Q7Z7C8 310 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 ZSCAN1Q8NBB4 408 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 TRIM11Q96F44 468 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 CMKLR1Q99788 373 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 MAGEB5Q9BZ81 275 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 WDR26Q9H7D7 661 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 CAAP1Q9H8G2 361 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 ZWILCHQ9H900 591 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 SEPT3Q9UH03 358 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 OR1A2Q9Y585 309 aa13.87□□□□□ -0.19
PTPRE-203ENST00000442830 SPTA1P02549 2419 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 PRPSAP2O60256 369 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 SOCS5O75159 536 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 RECQL5O94762 991 aaPredicted RBP13.86□□□□□ -0.19
PTPRE-203ENST00000442830 ITGB2P05107 769 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 KRT10P13645 584 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 TNFAIP3P21580 790 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 SLC5A2P31639 672 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 PAPOLAP51003 745 aaKnown RBP13.86□□□□□ -0.19
PTPRE-203ENST00000442830 CCL7P80098 99 aa13.86□□□□□ -0.19
PTPRE-203ENST00000442830 TMEM164Q5U3C3 297 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms