RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 FOXR1Q6PIV2 292 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 LVRNQ6Q4G3 990 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 ZNF571Q7Z3V5 609 aaPredicted RBP11.85□□□□□ -0.51
TTC28-203ENST00000442232 ARL14Q8N4G2 192 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 KYQ8NBH2 561 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 OR6C4Q8NGE1 309 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 PCDH19Q8TAB3 1148 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 TSACCQ96A04 125 aaPredicted RBP11.85□□□□□ -0.51
TTC28-203ENST00000442232 CCDC97Q96F63 343 aaPredicted RBP11.85□□□□□ -0.51
TTC28-203ENST00000442232 ATXN7L3BQ96GX2 97 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 ZNF599Q96NL3 588 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 PEBP4Q96S96 227 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 SYT11Q9BT88 431 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 AIPL1Q9NZN9 384 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 OR1A2Q9Y585 309 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 CELSR3Q9NYQ7 3312 aa11.85□□□□□ -0.51
TTC28-203ENST00000442232 CCDC187A0A096LP49 1063 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 A0A1W2PQ67 120 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 CFAP69A5D8W1 941 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 PDE2AO00408 941 aaPredicted RBP11.84□□□□□ -0.51
TTC28-203ENST00000442232 BUB1BO60566 1050 aaPredicted RBP11.84□□□□□ -0.51
TTC28-203ENST00000442232 LRCH4O75427 683 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 SERPINB6P35237 376 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 PCK1P35558 622 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 PRKCIP41743 596 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 HCAR3P49019 387 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 KIAA1024LP59773 190 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 NSUN2Q08J23 767 aaKnown RBP eCLIP11.84□□□□□ -0.51
TTC28-203ENST00000442232 LBRQ14739 615 aaKnown RBP11.84□□□□□ -0.51
TTC28-203ENST00000442232 ACOX1Q15067 660 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 ALG11Q2TAA5 492 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 CAVIN1Q6NZI2 390 aaKnown RBP11.84□□□□□ -0.51
TTC28-203ENST00000442232 IGF2-ASQ6U949 168 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 TMCO3Q6UWJ1 677 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 DPPA4Q7L190 304 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 ATPAF2Q8N5M1 289 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 WDR36Q8NI36 951 aaKnown RBP11.84□□□□□ -0.51
TTC28-203ENST00000442232 HSPH1Q92598 858 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 VOPP1Q96AW1 172 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 BBC3Q96PG8 261 aaPredicted RBP11.84□□□□□ -0.51
TTC28-203ENST00000442232 GFM1Q96RP9 751 aaKnown RBP11.84□□□□□ -0.51
TTC28-203ENST00000442232 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.84□□□□□ -0.51
TTC28-203ENST00000442232 DPH1Q9BZG8 443 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 STRADBQ9C0K7 418 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 CLPBQ9H078 707 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 KCTD5Q9NXV2 234 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 TMEM63CQ9P1W3 806 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 MOSPD1Q9UJG1 213 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 ENTPD2Q9Y5L3 495 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 RAI2Q9Y5P3 530 aa11.84□□□□□ -0.51
TTC28-203ENST00000442232 COL27A1Q8IZC6 1860 aaPredicted RBP11.83□□□□□ -0.52
TTC28-203ENST00000442232 A0A1B0GTH6 734 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 TMX2-CTNND1H3BSU7 103 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 TK2O00142 265 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 DDX3XO00571 662 aaKnown RBP eCLIP11.83□□□□□ -0.52
TTC28-203ENST00000442232 ATXN7O15265 892 aaPredicted RBP11.83□□□□□ -0.52
TTC28-203ENST00000442232 KLK10O43240 276 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 SOCS5O75159 536 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 RECQL5O94762 991 aaPredicted RBP11.83□□□□□ -0.52
TTC28-203ENST00000442232 CPP00450 1065 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 CELA2BP08218 269 aaPredicted RBP11.83□□□□□ -0.52
TTC28-203ENST00000442232 KRT10P13645 584 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 MLLT3P42568 568 aaPredicted RBP11.83□□□□□ -0.52
TTC28-203ENST00000442232 RGRP47804 291 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 C19orf57Q0VDD7 668 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 DPYSQ14117 519 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 TSR1Q2NL82 804 aaKnown RBP11.83□□□□□ -0.52
TTC28-203ENST00000442232 SMTNL2Q2TAL5 461 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 BOLA3Q53S33 107 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 AFMIDQ63HM1 303 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 TAF8Q7Z7C8 310 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 ZSWIM9Q86XI8 627 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 ARHGAP12Q8IWW6 846 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 NPWQ8N729 165 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 LSM14AQ8ND56 463 aaKnown RBP11.83□□□□□ -0.52
TTC28-203ENST00000442232 OR56A4Q8NGH8 313 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 PDCD6IPQ8WUM4 868 aaKnown RBP11.83□□□□□ -0.52
TTC28-203ENST00000442232 SLC39A7Q92504 469 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 CCDC74AQ96AQ1 378 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 HIC2Q96JB3 615 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 PSKH2Q96QS6 385 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 WDR26Q9H7D7 661 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 EPB41L5Q9HCM4 733 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.83□□□□□ -0.52
TTC28-203ENST00000442232 HAUS2Q9NVX0 235 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 WDR70Q9NW82 654 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.83□□□□□ -0.52
TTC28-203ENST00000442232 CWC15Q9P013 229 aaKnown RBP11.83□□□□□ -0.52
TTC28-203ENST00000442232 PNMA8BQ9ULN7 279 aaPredicted RBP11.83□□□□□ -0.52
TTC28-203ENST00000442232 PCDHGA8Q9Y5G5 932 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 BZW2Q9Y6E2 419 aaKnown RBP11.83□□□□□ -0.52
TTC28-203ENST00000442232 KIF26BQ2KJY2 2108 aa11.83□□□□□ -0.52
TTC28-203ENST00000442232 RPLP0P05388 317 aaKnown RBP11.82□□□□□ -0.52
TTC28-203ENST00000442232 CYP2A6P11509 494 aaPredicted RBP11.82□□□□□ -0.52
TTC28-203ENST00000442232 SKILP12757 684 aa11.82□□□□□ -0.52
TTC28-203ENST00000442232 SSR1P43307 286 aaKnown RBP11.82□□□□□ -0.52
TTC28-203ENST00000442232 PIGHQ14442 188 aaPredicted RBP11.82□□□□□ -0.52
TTC28-203ENST00000442232 KRT81Q14533 505 aa11.82□□□□□ -0.52
TTC28-203ENST00000442232 DPYSL2Q16555 572 aa11.82□□□□□ -0.52
TTC28-203ENST00000442232 TAF1BQ53T94 588 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms