RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 PLATP00750 562 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 SRPRAP08240 638 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 IRF1P10914 325 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 KRT13P13646 458 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 TNFRSF1AP19438 455 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 PON1P27169 355 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 HOXA13P31271 388 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 IDUAP35475 653 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 RAP1GAPP47736 663 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 PNLIPRP2P54317 469 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 IL1RL1Q01638 556 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 GUCY1B3Q02153 619 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 GRAPQ13588 217 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 TBC1D25Q3MII6 688 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 CRY2Q49AN0 593 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 IGSF11Q5DX21 431 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 PMS2CLQ68D20 193 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 CNSTQ6PJW8 725 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 RAPH1Q70E73 1250 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 ZNF551Q7Z340 670 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 NUP54Q7Z3B4 507 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 WDR53Q7Z5U6 358 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 HJURPQ8NCD3 748 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 CELF1Q92879 486 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 WWC2-AS2Q96NR7 200 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 NEK1Q96PY6 1258 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 GAD1Q99259 594 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 CITED2Q99967 270 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 KIFC3Q9BVG8 833 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 CCDC106Q9BWC9 280 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 SSBP3Q9BWW4 388 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 DNAI2Q9GZS0 605 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 TCF7L2Q9NQB0 619 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 SERTAD4Q9NUC0 356 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 ZNHIT6Q9NWK9 470 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 ARHGEF38Q9NXL2 777 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 TESQ9UGI8 421 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 SIRT4Q9Y6E7 314 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 SPATA31A1Q5TZJ5 1347 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 WDR62O43379 1518 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 DCAF1Q9Y4B6 1507 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 LOC102723996A0A087X1L8 192 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 FAM237AA0A1B0GTK4 181 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 TMCO5BA8MYB1 307 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 M0QX08 132 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 SEC14L5O43304 696 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 TADA2AO75478 443 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 DDAH2O95865 285 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 FTCDO95954 541 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 IL1AP01583 271 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 HLA-DQA2P01906 255 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 TFP02787 698 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 ENO1P06733 434 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 PTAFRP25105 342 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 YWHAZP63104 245 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 AKAP17AQ02040 695 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 GRIK3Q13003 919 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 ALCAMQ13740 583 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 NFE2L1Q14494 772 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 IL11RAQ14626 422 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 ZSCAN26Q16670 478 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 ZNF674Q2M3X9 581 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 SPDYAQ5MJ70 313 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 TTC39AQ5SRH9 613 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 HMBOX1Q6NT76 420 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 ALKBH5Q6P6C2 394 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 ZNF474Q6S9Z5 364 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 PET117Q6UWS5 81 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 DHRS13Q6UX07 377 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 PIWIL3Q7Z3Z3 882 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 ZER1Q7Z7L7 766 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 RFX6Q8HWS3 928 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 TBC1D21Q8IYX1 336 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 CHST13Q8NET6 341 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 KIF18AQ8NI77 898 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 FEZF2Q8TBJ5 459 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 MYEOVQ96EZ4 313 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 RMDN2Q96LZ7 410 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 BBS4Q96RK4 519 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 MACROD1Q9BQ69 325 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 AIFM2Q9BRQ8 373 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 NAA11Q9BSU3 229 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 IFT27Q9BW83 186 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 CIPCQ9C0C6 399 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 TKTL2Q9H0I9 626 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 ASIC5Q9NY37 505 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 GRHL1Q9NZI5 618 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 COQ3Q9NZJ6 369 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 TMEM94Q12767 1356 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 A0A1W2PR77 199 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 TMEM200CA6NKL6 621 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 MPPED1O15442 326 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 PEX1O43933 1283 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 MITFO75030 526 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 ZNF623O75123 536 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 SLC25A12O75746 678 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 MT-CO3P00414 261 aa4.19□□□□□ -1.74
CDC42BPA-207ENST00000441725 PAHP00439 452 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms