RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 ADIGQ0VDE8 80 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 MAP7D1Q3KQU3 841 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 ZIK1Q3SY52 487 aaPredicted RBP13.62□□□□□ -0.23
PCNX3-202ENST00000439247 SLC36A3Q495N2 470 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 VPS26BQ4G0F5 336 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 RBM20Q5T481 1227 aaKnown RBP13.62□□□□□ -0.23
PCNX3-202ENST00000439247 ESRP1Q6NXG1 681 aaKnown RBP13.62□□□□□ -0.23
PCNX3-202ENST00000439247 SIX6OS1Q8N1H7 587 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 MAGEE2Q8TD90 523 aaPredicted RBP13.62□□□□□ -0.23
PCNX3-202ENST00000439247 SLC2A14Q8TDB8 520 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 GPR20Q99678 358 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 HEPHQ9BQS7 1158 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 ATXN3LQ9H3M9 355 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 PIF1Q9H611 641 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 NCKIPSDQ9NZQ3 722 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 LRRC37A2A6NM11 1700 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 PLXNB2O15031 1838 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 DHRS12A0PJE2 317 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 CLDN5O00501 218 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 PPP6CO00743 305 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 UBFD1O14562 309 aaKnown RBP13.62□□□□□ -0.23
PCNX3-202ENST00000439247 BEST1O76090 585 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 JCHAINP01591 159 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 APOA4P06727 396 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 DCKP27707 260 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 TRAP1Q12931 704 aaKnown RBP13.62□□□□□ -0.23
PCNX3-202ENST00000439247 NFATC3Q12968 1075 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 CRHR2Q13324 411 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 SAMD4BQ5PRF9 694 aaKnown RBP13.62□□□□□ -0.23
PCNX3-202ENST00000439247 TMEM53Q6P2H8 277 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 RDH11Q8TC12 318 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 CORO1BQ9BR76 489 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 UPF3AQ9H1J1 476 aaKnown RBP13.62□□□□□ -0.23
PCNX3-202ENST00000439247 LTB4R2Q9NPC1 389 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 SACM1LQ9NTJ5 587 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 USP22Q9UPT9 525 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 FADS3Q9Y5Q0 445 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 DGKBQ9Y6T7 804 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 ALDH2P05091 517 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 CDH3P22223 829 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 EIF2B2P49770 351 aaKnown RBP13.62□□□□□ -0.23
PCNX3-202ENST00000439247 RAB10P61026 200 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 GALNT2Q10471 571 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 METTL7BQ6UX53 244 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 CUZD1Q86UP6 607 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 CAMK1DQ8IU85 385 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 ZNF784Q8NCA9 323 aaPredicted RBP13.62□□□□□ -0.23
PCNX3-202ENST00000439247 TRPC4APQ8TEL6 797 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 DNAI2Q9GZS0 605 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 MAP10Q9P2G4 905 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 MID2Q9UJV3 735 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 SARDHQ9UL12 918 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 KIAA1257Q9ULG3 409 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 SLC27A5Q9Y2P5 690 aa13.62□□□□□ -0.23
PCNX3-202ENST00000439247 HTR3EA5X5Y0 456 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 ACOX3O15254 700 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 BDNFP23560 247 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 EEF1B2P24534 225 aaKnown RBP13.61□□□□□ -0.23
PCNX3-202ENST00000439247 MAP4P27816 1152 aaKnown RBP13.61□□□□□ -0.23
PCNX3-202ENST00000439247 TKTP29401 623 aaKnown RBP13.61□□□□□ -0.23
PCNX3-202ENST00000439247 SQLEQ14534 574 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 ZNF792Q3KQV3 632 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 TBPL2Q6SJ96 375 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 PPP1R13LQ8WUF5 828 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 FANCEQ9HB96 536 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 CDHR5Q9HBB8 845 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 CCM2LQ9NUG4 571 aaPredicted RBP13.61□□□□□ -0.23
PCNX3-202ENST00000439247 GINS2Q9Y248 185 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 ST14Q9Y5Y6 855 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 DCLK1O15075 740 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 STMN1P16949 149 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 CTGFP29279 349 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 MATKP42679 507 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 CDH13P55290 713 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 RWDD4Q6NW29 188 aaKnown RBP13.61□□□□□ -0.23
PCNX3-202ENST00000439247 ARMCX2Q7L311 632 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 PIWIL3Q7Z3Z3 882 aaKnown RBP13.61□□□□□ -0.23
PCNX3-202ENST00000439247 NPLOC4Q8TAT6 608 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 ADAMTS16Q8TE57 1224 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 SH3RF2Q8TEC5 729 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 GTF3C2Q8WUA4 911 aaPredicted RBP13.61□□□□□ -0.23
PCNX3-202ENST00000439247 HDAC10Q969S8 669 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 CSF3RQ99062 836 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 MRPL46Q9H2W6 279 aaKnown RBP13.61□□□□□ -0.23
PCNX3-202ENST00000439247 ASB7Q9H672 318 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 AGPAT4Q9NRZ5 378 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 DSEQ9UL01 958 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 ANKRD6Q9Y2G4 727 aa13.61□□□□□ -0.23
PCNX3-202ENST00000439247 SULT1C4O75897 302 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 ARNTP27540 789 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 SLC1A2P43004 574 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 PIGFQ07326 219 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 KIF19Q2TAC6 998 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 PYCR3Q53H96 274 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 NOMO2Q5JPE7 1267 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 PERM1Q5SV97 790 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 MFSD2AQ8NA29 543 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 TOP1MTQ969P6 601 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 TUBA8Q9NY65 449 aaPredicted RBP13.6□□□□□ -0.23
PCNX3-202ENST00000439247 AKT3Q9Y243 479 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms