RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 MCEEQ96PE7 176 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 KLF6Q99612 283 aaPredicted RBP7.84□□□□□ -1.15
VPS50-204ENST00000438395 CNPY3Q9BT09 278 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 LRRC61Q9BV99 259 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 DPH1Q9BZG8 443 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 STRADBQ9C0K7 418 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 GPAMQ9HCL2 828 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 TIMMDC1Q9NPL8 285 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 GPR27Q9NS67 375 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 NDFIP2Q9NV92 336 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 DKK3Q9UBP4 350 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 GULP1Q9UBP9 304 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 PADI4Q9UM07 663 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 SATB2Q9UPW6 733 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 DYRK1BQ9Y463 629 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 ACTL7AQ9Y615 435 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 ARID1BQ8NFD5 2236 aaPredicted RBP7.84□□□□□ -1.15
VPS50-204ENST00000438395 CCDC187A0A096LP49 1063 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 LY6G6EA0A0G2JKS1 128 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 EME2A4GXA9 379 aaPredicted RBP7.83□□□□□ -1.16
VPS50-204ENST00000438395 ARHGAP42A6NI28 874 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 SIGLEC16A6NMB1 481 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 LGALS16A8MUM7 142 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 GOLGA6L22H0YM25 854 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 TMX2-CTNND1H3BSU7 103 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 CACNB4O00305 520 aaPredicted RBP7.83□□□□□ -1.16
VPS50-204ENST00000438395 CCP110O43303 1012 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 PIGNO95427 931 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 PCCBP05166 539 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 GIMD1P0DJR0 217 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 TGM2P21980 687 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 KELP23276 732 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 SERPINA4P29622 427 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 HTR7P34969 479 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 ANP32AP39687 249 aaKnown RBP7.83□□□□□ -1.16
VPS50-204ENST00000438395 KLK7P49862 253 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 JAM2P57087 298 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 MYL5Q02045 173 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 EIF2B5Q13144 721 aaKnown RBP7.83□□□□□ -1.16
VPS50-204ENST00000438395 BIRC2Q13490 618 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 SERINC3Q13530 473 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 TCEA2Q15560 299 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 RAB6CQ53S08 254 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 CDKAL1Q5VV42 579 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 DPY19L2P1Q6NXN4 242 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 WDR59Q6PJI9 974 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 LYPD4Q6UWN0 246 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 ZNF605Q86T29 641 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 GKN2Q86XP6 184 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 DNAAF5Q86Y56 855 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 PHF13Q86YI8 300 aaPredicted RBP7.83□□□□□ -1.16
VPS50-204ENST00000438395 JAMLQ86YT9 394 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 SLC35F3Q8IY50 421 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 WDR36Q8NI36 951 aaKnown RBP7.83□□□□□ -1.16
VPS50-204ENST00000438395 CENPIQ92674 756 aaPredicted RBP7.83□□□□□ -1.16
VPS50-204ENST00000438395 POM121Q96HA1 1249 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 EXOC2Q96KP1 924 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 GFM1Q96RP9 751 aaKnown RBP7.83□□□□□ -1.16
VPS50-204ENST00000438395 CCDC3Q9BQI4 270 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 RAB6CQ9H0N0 254 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 ATP13A3Q9H7F0 1226 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 SP110Q9HB58 689 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 ETNK1Q9HBU6 452 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 CPNE5Q9HCH3 593 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 EPB41L5Q9HCM4 733 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 ANO10Q9NW15 660 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 SIRPGQ9P1W8 387 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 KLQ9UEF7 1012 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 GPR34Q9UPC5 381 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 MFHAS1Q9Y4C4 1052 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 HRH3Q9Y5N1 445 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 U3KQA8 63 aa7.83□□□□□ -1.16
VPS50-204ENST00000438395 PIEZO2Q9H5I5 2752 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 TP53BP1Q12888 1972 aaPredicted RBP7.82□□□□□ -1.16
VPS50-204ENST00000438395 SMG1Q96Q15 3661 aaKnown RBP7.82□□□□□ -1.16
VPS50-204ENST00000438395 EIF3CLB5ME19 914 aaKnown RBP7.82□□□□□ -1.16
VPS50-204ENST00000438395 EEF2KO00418 725 aaKnown RBP7.82□□□□□ -1.16
VPS50-204ENST00000438395 EPHB6O15197 1021 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 YY2O15391 372 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 GCATO75600 419 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 TNFSF15O95150 251 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 CD160O95971 181 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 THBS1P07996 1170 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 ITGA2BP08514 1039 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 C6P13671 934 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 TSHRP16473 764 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 FERP16591 822 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 CHRNB2P17787 502 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 NFKBIAP25963 317 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 PEX5P50542 639 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 HK3P52790 923 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 COPB1P53618 953 aaKnown RBP7.82□□□□□ -1.16
VPS50-204ENST00000438395 GSCP56915 257 aaPredicted RBP7.82□□□□□ -1.16
VPS50-204ENST00000438395 SRP54P61011 504 aaKnown RBP7.82□□□□□ -1.16
VPS50-204ENST00000438395 CFHR1Q03591 330 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 EIF3IQ13347 325 aaKnown RBP7.82□□□□□ -1.16
VPS50-204ENST00000438395 NFATC4Q14934 902 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 STX1AQ16623 288 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 TPRG1LQ5T0D9 272 aa7.82□□□□□ -1.16
VPS50-204ENST00000438395 LVRNQ6Q4G3 990 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms