RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 SRP54P61011 504 aaKnown RBP7.82□□□□□ -1.16
VPS50-203ENST00000436177 CFHR1Q03591 330 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 VAC14Q08AM6 782 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 EIF3IQ13347 325 aaKnown RBP7.82□□□□□ -1.16
VPS50-203ENST00000436177 NFATC4Q14934 902 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 STX1AQ16623 288 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 TPRG1LQ5T0D9 272 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 LVRNQ6Q4G3 990 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 IGF2-ASQ6U949 168 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 ENPP7Q6UWV6 458 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 MON1BQ7L1V2 547 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 UMODL1-AS1Q8N2C9 162 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 PYROXD2Q8N2H3 581 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 SDR16C5Q8N3Y7 309 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 KYQ8NBH2 561 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 OR6C4Q8NGE1 309 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 CCDC74AQ96AQ1 378 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 CENPTQ96BT3 561 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 WDR92Q96MX6 357 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 ZNF641Q96N77 438 aaPredicted RBP7.82□□□□□ -1.16
VPS50-203ENST00000436177 GBP4Q96PP9 640 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 TUBGCP5Q96RT8 1024 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 EIF3CQ99613 913 aaKnown RBP7.82□□□□□ -1.16
VPS50-203ENST00000436177 AGPAT1Q99943 283 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 CINPQ9BW66 212 aaPredicted RBP7.82□□□□□ -1.16
VPS50-203ENST00000436177 BOCQ9BWV1 1114 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 CPEB1Q9BZB8 566 aaKnown RBP7.82□□□□□ -1.16
VPS50-203ENST00000436177 TCEAL2Q9H3H9 227 aaPredicted RBP7.82□□□□□ -1.16
VPS50-203ENST00000436177 DHX35Q9H5Z1 703 aaKnown RBP7.82□□□□□ -1.16
VPS50-203ENST00000436177 CAAP1Q9H8G2 361 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 PCDH12Q9NPG4 1184 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 ASCL3Q9NQ33 180 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 FANCLQ9NW38 375 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 AKAP7Q9P0M2 348 aaPredicted RBP7.82□□□□□ -1.16
VPS50-203ENST00000436177 LHX3Q9UBR4 397 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 KLF15Q9UIH9 416 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 MOSPD1Q9UJG1 213 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 NEU3Q9UQ49 428 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 ATP8A1Q9Y2Q0 1164 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 PCDHGA8Q9Y5G5 932 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 MYO18BQ8IUG5 2567 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 AHCTF1Q8WYP5 2266 aa7.82□□□□□ -1.16
VPS50-203ENST00000436177 BPTFQ12830 3046 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 TRPM6Q9BX84 2022 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 ASH1LQ9NR48 2969 aaKnown RBP7.81□□□□□ -1.16
VPS50-203ENST00000436177 D6RAR5 112 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 DFFAO00273 331 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 PDE2AO00408 941 aaPredicted RBP7.81□□□□□ -1.16
VPS50-203ENST00000436177 PLD2O14939 933 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 ZW10O43264 779 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 PRPSAP2O60256 369 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 PRAMEF11O60813 436 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 PALMO75781 387 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 RNF8O76064 485 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 TNFP01375 233 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 RPLP0P05388 317 aaKnown RBP7.81□□□□□ -1.16
VPS50-203ENST00000436177 ELFN1P0C7U0 828 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 JMJD7P0C870 316 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 UNGP13051 313 aaPredicted RBP7.81□□□□□ -1.16
VPS50-203ENST00000436177 TIMP2P16035 220 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 PSMA2P25787 234 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 MMP12P39900 470 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 LIG3P49916 1009 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 NDST2P52849 883 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 POLR2LP62875 67 aaKnown RBP7.81□□□□□ -1.16
VPS50-203ENST00000436177 BCL2L1Q07817 233 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 PTP4A2Q12974 167 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 MTM1Q13496 603 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 ARHGEF7Q14155 803 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 INPP5AQ14642 412 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 UGP2Q16851 508 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 ALG11Q2TAA5 492 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 WSCD2Q2TBF2 565 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 ZSCAN23Q3MJ62 389 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 TMEM52BQ4KMG9 183 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 PPP6R3Q5H9R7 873 aaPredicted RBP7.81□□□□□ -1.16
VPS50-203ENST00000436177 PERM1Q5SV97 790 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 CCDC81Q6ZN84 652 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 TAF8Q7Z7C8 310 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 FBXO39Q8N4B4 442 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 TP53I13Q8NBR0 393 aaPredicted RBP7.81□□□□□ -1.16
VPS50-203ENST00000436177 NETO2Q8NC67 525 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 HCAR2Q8TDS4 363 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 TSACCQ96A04 125 aaPredicted RBP7.81□□□□□ -1.16
VPS50-203ENST00000436177 WBP1Q96G27 269 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 CELF6Q96J87 481 aaKnown RBP7.81□□□□□ -1.16
VPS50-203ENST00000436177 TMEM74Q96NL1 305 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 SLC46A1Q96NT5 459 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 PCDHB18PQ96TA0 734 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 EDEM3Q9BZQ6 932 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 ZMYND15Q9H091 742 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 NAT10Q9H0A0 1025 aaKnown RBP7.81□□□□□ -1.16
VPS50-203ENST00000436177 SUV39H2Q9H5I1 410 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 WDR26Q9H7D7 661 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 MBNL1Q9NR56 388 aaKnown RBP7.81□□□□□ -1.16
VPS50-203ENST00000436177 PARVAQ9NVD7 372 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 FZD10Q9ULW2 581 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 AP4E1Q9UPM8 1137 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 SIK3Q9Y2K2 1263 aa7.81□□□□□ -1.16
VPS50-203ENST00000436177 COQ6Q9Y2Z9 468 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms