RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 EIF3CLB5ME19 914 aaKnown RBP11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 TMX2-CTNND1H3BSU7 103 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 TNFRSF10CO14798 259 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 RECQL5O94762 991 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 PCCBP05166 539 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 CTSEP14091 401 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 GLB1P16278 677 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 XPAP23025 273 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 SLC5A2P31639 672 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 TRIM23P36406 574 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 COPB1P53618 953 aaKnown RBP11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 TPI1P60174 286 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 HLTFQ14527 1009 aaKnown RBP eCLIP11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 FOXR1Q6PIV2 292 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 LIPIQ6XZB0 460 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 CCDC81Q6ZN84 652 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 CLEC17AQ6ZS10 378 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 RAB11FIP2Q7L804 512 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 SPRED1Q7Z699 444 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 C17orf82Q86X59 251 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 CCNJLQ8IV13 435 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 SLITRK4Q8IW52 837 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 ARHGAP12Q8IWW6 846 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 MCOLN2Q8IZK6 566 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 FBXO39Q8N4B4 442 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 ARFGAP1Q8N6T3 406 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 NPWQ8N729 165 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 PLA2G15Q8NCC3 412 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 TSEN2Q8NCE0 465 aaKnown RBP11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 NSMCE3Q96MG7 304 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 TMEM74Q96NL1 305 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 GFM1Q96RP9 751 aaKnown RBP11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 EIF3CQ99613 913 aaKnown RBP11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 STRADBQ9C0K7 418 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 HSD3B7Q9H2F3 369 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 DONSONQ9NYP3 566 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 CHMP5Q9NZZ3 219 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 GULP1Q9UBP9 304 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 DOLKQ9UPQ8 538 aa11.01□□□□□ -0.65
SPTLC1P4-201ENST00000435997 TMEM202A6NGA9 273 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 LRRC10BA6NIK2 292 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 NVLO15381 856 aaKnown RBP11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 NUDT21O43809 227 aaKnown RBP11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 PRKCGP05129 697 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 HGFP14210 728 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 SERPINA4P29622 427 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 SRSF6Q13247 344 aaKnown RBP11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 MAMLD1Q13495 774 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 RFTN1Q14699 578 aaPredicted RBP11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 NR1D2Q14995 579 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 TCEA2Q15560 299 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 CA9Q16790 459 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 ZSCAN23Q3MJ62 389 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 C14orf28Q4W4Y0 310 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 SCYL2Q6P3W7 929 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 RFX8Q6ZV50 586 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 DPPA4Q7L190 304 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 TMPRSS9Q7Z410 1059 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 ZNF438Q7Z4V0 828 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 SFTPA2Q8IWL1 248 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 PELI3Q8N2H9 469 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 OR56A4Q8NGH8 313 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 TMEM159Q96B96 161 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 CELF6Q96J87 481 aaKnown RBP11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 PEBP4Q96S96 227 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 AGPAT1Q99943 283 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 SLC39A8Q9C0K1 460 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 ATP13A3Q9H7F0 1226 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 SYNDIG1Q9H7V2 258 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 EPB41L5Q9HCM4 733 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 FANCLQ9NW38 375 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 GPATCH2LQ9NWQ4 482 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 LIMA1Q9UHB6 759 aaKnown RBP11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 AP4E1Q9UPM8 1137 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 LOXL2Q9Y4K0 774 aa11□□□□□ -0.65
SPTLC1P4-201ENST00000435997 ANKRD62A6NC57 917 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 ARHGAP42A6NI28 874 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 CACNB4O00305 520 aaPredicted RBP10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 PALMO75781 387 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 TNFP01375 233 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 ITGB2P05107 769 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 TPM2P07951 284 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 ELFN1P0C7U0 828 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 LIPCP11150 499 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 PAPOLAP51003 745 aaKnown RBP10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 AP1S1P61966 158 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 NSUN2Q08J23 767 aaKnown RBP eCLIP10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 TGIF1Q15583 401 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 LINC00303Q3SY05 128 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 CFAP58Q5T655 872 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 PLEKHA7Q6IQ23 1121 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 ACAD10Q6JQN1 1059 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 ARHGAP36Q6ZRI8 547 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 RD3Q7Z3Z2 195 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 SRLQ86TD4 932 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 DTX1Q86Y01 620 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 EXD3Q8N9H8 876 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 NEK11Q8NG66 645 aa10.99□□□□□ -0.65
SPTLC1P4-201ENST00000435997 FNIP1Q8TF40 1166 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms