RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 FBXL22Q6P050 247 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 SLC30A9Q6PML9 568 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 ISCA2Q86U28 154 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 RNF135Q8IUD6 432 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 COLGALT2Q8IYK4 626 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 LILRA2Q8N149 483 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 CATSPER1Q8NEC5 780 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 PEX13Q92968 403 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 IGSF8Q969P0 613 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 HDAC10Q969S8 669 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 BTN2A3PQ96KV6 586 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 MRPL1Q9BYD6 325 aaKnown RBP16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 SP110Q9HB58 689 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 PAPOLBQ9NRJ5 636 aaKnown RBP16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 RGS18Q9NS28 235 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 MARCH4Q9P2E8 410 aaPredicted RBP16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 SUCOQ9UBS9 1254 aaKnown RBP16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 BPTFQ12830 3046 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 MIA3Q5JRA6 1907 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 FBP2O00757 339 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 UBFD1O14562 309 aaKnown RBP16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 IGLV3-27P01718 113 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 KCNC1P48547 511 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 CLCN2P51788 898 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 IL10RBQ08334 325 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 STX5Q13190 355 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 BTG3Q14201 252 aaPredicted RBP16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 TLR1Q15399 786 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 KCNA10Q16322 511 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 LIN52Q52LA3 116 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 PTAR1Q7Z6K3 402 aaPredicted RBP16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 RTN4RL1Q86UN2 441 aaPredicted RBP16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 ATP6V0D2Q8N8Y2 350 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 SPDYE1Q8NFV5 336 aaPredicted RBP16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 GPR150Q8NGU9 434 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 PABPC5Q96DU9 382 aaKnown RBP16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 KLHL32Q96NJ5 620 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 UNC93B1Q9H1C4 597 aa16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 UXTQ9UBK9 157 aaPredicted RBP16.14■□□□□ 0.17
HLA-DQB2-231ENST00000435145 FRMPD3Q5JV73 1810 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 TRIM24O15164 1050 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 UBDO15205 165 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 DNAJA2O60884 412 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 EOMESO95936 686 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 FDXRP22570 491 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 CST5P28325 142 aaPredicted RBP16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 MSX2P35548 267 aaPredicted RBP16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 ATP4BP51164 291 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 SUOXP51687 545 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 CHN2P52757 468 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 PSME3P61289 254 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 CRHR2Q13324 411 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 CLLU1OSQ5K130 101 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 FAM45BPQ6NSW5 357 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 GLB1LQ6UWU2 654 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 PNPLA1Q8N8W4 532 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 FAM45AQ8TCE6 357 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 NCSTNQ92542 709 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 TOP1MTQ969P6 601 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 ASB9Q96DX5 294 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 LRGUKQ96M69 825 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 GCNAQ96QF7 691 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 MRPL40Q9NQ50 206 aaKnown RBP16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 CACNA2D2Q9NY47 1150 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 RAB26Q9ULW5 256 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 TRAF6Q9Y4K3 522 aa16.13■□□□□ 0.17
HLA-DQB2-231ENST00000435145 PSMD12O00232 456 aaPredicted RBP16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 C8BP07358 591 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 PABPC4LP0CB38 370 aaKnown RBP16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 HOXB8P17481 243 aaPredicted RBP16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 GRIA2P42262 883 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 PLK1P53350 603 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 TIAL1Q01085 375 aaKnown RBP eCLIP16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 ITKQ08881 620 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 EFEMP1Q12805 493 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 SERINC3Q13530 473 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 FASTKQ14296 549 aaKnown RBP16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 PPP1R3AQ16821 1122 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 PARP15Q460N3 678 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 ZNF678Q5SXM1 525 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 THEMIS2Q5TEJ8 643 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 C8orf82Q6P1X6 216 aaPredicted RBP16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 LARP4Q71RC2 724 aaKnown RBP eCLIP16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 RPS27LQ71UM5 84 aaKnown RBP16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 RNF148Q8N7C7 305 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 OR6P1Q8NGX9 317 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 SH3RF2Q8TEC5 729 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 TMA16Q96EY4 203 aaKnown RBP16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 FEM1CQ96JP0 617 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 CENPKQ9BS16 269 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 POLR3BQ9NW08 1133 aaPredicted RBP16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 KCTD3Q9Y597 815 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 TLL2Q9Y6L7 1015 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 EPOP01588 193 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 ARSAP15289 507 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 GRK4P32298 578 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 INHBEP58166 350 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 PRAMEP78395 509 aa16.12■□□□□ 0.17
HLA-DQB2-231ENST00000435145 FAM189BP81408 668 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 263.3 ms