RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TULP2O00295 520 aa3.4□□□□□ -1.86
CLK1-204ENST00000432425 EIF3FO00303 357 aaPredicted RBP3.4□□□□□ -1.86
CLK1-204ENST00000432425 IGLV2-11P01706 119 aa3.4□□□□□ -1.86
CLK1-204ENST00000432425 IFIT1P09914 478 aaKnown RBP3.4□□□□□ -1.86
CLK1-204ENST00000432425 HNRNPH1P31943 449 aaKnown RBP3.4□□□□□ -1.86
CLK1-204ENST00000432425 CDH15P55291 814 aa3.4□□□□□ -1.86
CLK1-204ENST00000432425 NLRP5P59047 1200 aa3.4□□□□□ -1.86
CLK1-204ENST00000432425 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.4□□□□□ -1.86
CLK1-204ENST00000432425 LRRC8EQ6NSJ5 796 aa3.4□□□□□ -1.86
CLK1-204ENST00000432425 USP43Q70EL4 1123 aa3.4□□□□□ -1.86
CLK1-204ENST00000432425 TUBA1AQ71U36 451 aa3.4□□□□□ -1.86
CLK1-204ENST00000432425 SFR1Q86XK3 245 aa3.4□□□□□ -1.86
CLK1-204ENST00000432425 TMTC1Q8IUR5 882 aa3.4□□□□□ -1.86
CLK1-204ENST00000432425 MUC20Q8N307 709 aaPredicted RBP3.4□□□□□ -1.86
CLK1-204ENST00000432425 HERVK_113Q902F9 699 aa3.4□□□□□ -1.86
CLK1-204ENST00000432425 CD101Q93033 1021 aa3.4□□□□□ -1.86
CLK1-204ENST00000432425 HES6Q96HZ4 224 aa3.4□□□□□ -1.86
CLK1-204ENST00000432425 SCLT1Q96NL6 688 aa3.4□□□□□ -1.86
CLK1-204ENST00000432425 KXD1Q9BQD3 176 aa3.4□□□□□ -1.86
CLK1-204ENST00000432425 TUBA1CQ9BQE3 449 aa3.4□□□□□ -1.86
CLK1-204ENST00000432425 NFE2L3Q9Y4A8 694 aa3.4□□□□□ -1.86
CLK1-204ENST00000432425 BCAT2O15382 392 aaPredicted RBP3.39□□□□□ -1.87
CLK1-204ENST00000432425 KLK8O60259 260 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 UMODP07911 640 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 LINC00271P0C7V0 271 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 ETFAP13804 333 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 ITGAXP20702 1163 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 EDN2P20800 178 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 DGKAP23743 735 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 IRX6P78412 446 aaPredicted RBP3.39□□□□□ -1.87
CLK1-204ENST00000432425 TROAPQ12815 778 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 OASLQ15646 514 aaKnown RBP3.39□□□□□ -1.87
CLK1-204ENST00000432425 EFNB3Q15768 340 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 MMEL1Q495T6 779 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 ZNF766Q5HY98 468 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 TMEM81Q6P7N7 255 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 CCNI2Q6ZMN8 369 aaPredicted RBP3.39□□□□□ -1.87
CLK1-204ENST00000432425 RRM2BQ7LG56 351 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 LRRTM4Q86VH4 590 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 CPOQ8IVL8 374 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 DSELQ8IZU8 1212 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 PLD5Q8N7P1 536 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 MAB21L3Q8N8X9 362 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 LMNTD1Q8N9Z9 388 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 KCNH5Q8NCM2 988 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 AGBL3Q8NEM8 1001 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 SORCS1Q8WY21 1168 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 TANKQ92844 425 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 GCC1Q96CN9 775 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 FEM1CQ96JP0 617 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 NODALQ96S42 347 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 EVA1AQ9H8M9 152 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 UBTD1Q9HAC8 227 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 C17orf75Q9HAS0 396 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 BEX4Q9NWD9 120 aaPredicted RBP3.39□□□□□ -1.87
CLK1-204ENST00000432425 HCN3Q9P1Z3 774 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 FAM96BQ9Y3D0 163 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 A0A0G2JPF8 293 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 HNRNPCL3B7ZW38 293 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 BMPR1BO00238 502 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 SOCS6O14544 535 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 HNRNPCL1O60812 293 aaKnown RBP3.39□□□□□ -1.87
CLK1-204ENST00000432425 NDUFS7O75251 213 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 URODP06132 367 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 GALTP07902 379 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 MMP2P08253 660 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 HNRNPCL4P0DMR1 293 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 SRCP12931 536 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 HSD3B1P14060 373 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 CCR5P51681 352 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 ZNF155Q12901 538 aaPredicted RBP3.39□□□□□ -1.87
CLK1-204ENST00000432425 FOXD4Q12950 439 aaPredicted RBP3.39□□□□□ -1.87
CLK1-204ENST00000432425 PPP2R5BQ15173 497 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 HIST2H2ACQ16777 129 aaPredicted RBP3.39□□□□□ -1.87
CLK1-204ENST00000432425 OTUD3Q5T2D3 398 aaPredicted RBP3.39□□□□□ -1.87
CLK1-204ENST00000432425 NAA35Q5VZE5 725 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 WDR73Q6P4I2 378 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 CPLX2Q6PUV4 134 aaKnown RBP3.39□□□□□ -1.87
CLK1-204ENST00000432425 B3GNT6Q6ZMB0 384 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 C9orf139Q6ZV77 190 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 NOXA1Q86UR1 476 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 ZCCHC9Q8N567 271 aaKnown RBP3.39□□□□□ -1.87
CLK1-204ENST00000432425 ZBTB8BQ8NAP8 495 aaPredicted RBP3.39□□□□□ -1.87
CLK1-204ENST00000432425 TMEM19Q96HH6 336 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 GPR63Q9BZJ6 419 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 TTYH1Q9H313 450 aaPredicted RBP3.39□□□□□ -1.87
CLK1-204ENST00000432425 EBF2Q9HAK2 575 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 BPIFA1Q9NP55 256 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 CNGB3Q9NQW8 809 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 RCOR1Q9UKL0 485 aa3.39□□□□□ -1.87
CLK1-204ENST00000432425 TEX13CA0A0J9YWL9 993 aa3.38□□□□□ -1.87
CLK1-204ENST00000432425 GAGE10A6NGK3 116 aa3.38□□□□□ -1.87
CLK1-204ENST00000432425 PLRG1O43660 514 aaKnown RBP3.38□□□□□ -1.87
CLK1-204ENST00000432425 TACC1O75410 805 aa3.38□□□□□ -1.87
CLK1-204ENST00000432425 MT-CYBP00156 380 aaPredicted RBP3.38□□□□□ -1.87
CLK1-204ENST00000432425 HEXAP06865 529 aa3.38□□□□□ -1.87
CLK1-204ENST00000432425 IRF1P10914 325 aa3.38□□□□□ -1.87
CLK1-204ENST00000432425 CCT5P48643 541 aa3.38□□□□□ -1.87
CLK1-204ENST00000432425 ILF3Q12906 894 aaKnown RBP eCLIP3.38□□□□□ -1.871e-7■■■■■ 26.8
CLK1-204ENST00000432425 GRIK3Q13003 919 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms