RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 GIMAP2Q9UG22 337 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 SEC63Q9UGP8 760 aaKnown RBP3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 PADI1Q9ULC6 663 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 SESN1Q9Y6P5 492 aa3.26□□□□□ -1.89
HMGB1P27-201ENST00000431429 WDR33Q9C0J8 1336 aaKnown RBP3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 GLOD5A6NK44 160 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 WNT9BO14905 357 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 NDUFS3O75489 264 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 DAB1O75553 588 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 SOX30O94993 753 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 FTCDO95954 541 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 KLKB1P03952 638 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 RB1P06400 928 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 CHRNB1P11230 501 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 ETFAP13804 333 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 ENO3P13929 434 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 CHRNB2P17787 502 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 TBXAS1P24557 533 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 KRT20P35900 424 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 EIF2DP41214 584 aaKnown RBP3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 TGFB2P61812 414 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 ADORA2A-AS1P86434 159 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 MTX1Q13505 466 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 DRAP1Q14919 205 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 FAM133BQ5BKY9 247 aaKnown RBP3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 PRAMEF19Q5SWL8 479 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 CFAP58Q5T655 872 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 C10orf25Q5T742 122 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 STRIP1Q5VSL9 837 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 ANKRD54Q6NXT1 300 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 MIS18BP1Q6P0N0 1132 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 LCTLQ6UWM7 567 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 MTSS1LQ765P7 747 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 RD3Q7Z3Z2 195 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 ADGRG3Q86Y34 549 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 LINC00346Q8IVM7 164 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 HACE1Q8IYU2 909 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 TMTC2Q8N394 836 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 HORMAD2Q8N7B1 307 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 BEST2Q8NFU1 509 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 HUS1BQ8NHY5 278 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 TRPC4APQ8TEL6 797 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 NTN5Q8WTR8 489 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 NELL1Q92832 810 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 LRRC59Q96AG4 307 aaKnown RBP3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 TMEM18Q96B42 140 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZNF419Q96HQ0 510 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZFYVE19Q96K21 471 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 TMEM68Q96MH6 324 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 BBS4Q96RK4 519 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 SRSF8Q9BRL6 282 aaKnown RBP3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 NUF2Q9BZD4 464 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 FTOQ9C0B1 505 aaKnown RBP eCLIP3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 NPFFR1Q9GZQ6 430 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 ESRP2Q9H6T0 727 aaKnown RBP3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 SH2D4AQ9H788 454 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 AAMDCQ9H7C9 122 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 RANGRFQ9HD47 186 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 MKKSQ9NPJ1 570 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 TMEM184CQ9NVA4 438 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 SETD4Q9NVD3 440 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZNHIT2Q9UHR6 403 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 RPS6KA6Q9UK32 745 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 AAR2Q9Y312 384 aaKnown RBP3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 RAP2CQ9Y3L5 183 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 CEPT1Q9Y6K0 416 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 LAMC3Q9Y6N6 1575 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZMYM2Q9UBW7 1377 aa3.25□□□□□ -1.89
HMGB1P27-201ENST00000431429 ATAD2BQ9ULI0 1458 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 A0A1W2PPC1 479 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 DKC1O60832 514 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 SLC25A12O75746 678 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 NKX2-2O95096 273 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 EPN2O95208 641 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 CELA2AP08217 269 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZNF182P17025 639 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 TNFRSF1BP20333 461 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 PON1P27169 355 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 MPGP29372 298 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 SLC15A1P46059 708 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 PPP3CCP48454 512 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 CAMPP49913 170 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 CLCN3P51790 818 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 CLCN5P51795 746 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 PNLIPRP2P54317 469 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 SNX16P57768 344 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 SELENOVP59797 346 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 IRX6P78412 446 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 ZBED6P86452 979 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 BAATQ14032 418 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 INPP5JQ15735 1006 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 C2orf68Q2NKX9 166 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 SUPT20HL1Q3ZLR7 823 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 EPHA10Q5JZY3 1008 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 Q5PR19 223 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 NAA16Q6N069 864 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 SLC18B1Q6NT16 456 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 HMBOX1Q6NT76 420 aa3.24□□□□□ -1.89
HMGB1P27-201ENST00000431429 SLC30A6Q6NXT4 461 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms