RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 SEPT3Q9UH03 358 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 STOML2Q9UJZ1 356 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 CORO1CQ9ULV4 474 aaPredicted RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 TBC1D30Q9Y2I9 924 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 VWA7Q9Y334 891 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 CCDC162PA2VCL2 907 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 NEMP2A6NFY4 417 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 A8MT66 165 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 TBX10O75333 385 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 CLDN11O75508 207 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 RPP40O75818 363 aaKnown RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 GOT2P00505 430 aaKnown RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 PRLP01236 227 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 SERPINF2P08697 491 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 COX4I1P13073 169 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 NCF2P19878 526 aaPredicted RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 ITGAXP20702 1163 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 OGNP20774 298 aaKnown RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 SP100P23497 879 aaPredicted RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 ADSLP30566 484 aaPredicted RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 MNX1P50219 401 aaPredicted RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 ZNF140P52738 457 aaPredicted RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 SLC12A2P55011 1212 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 SEMA3AQ14563 771 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 RFTN1Q14699 578 aaPredicted RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 ARHGEF6Q15052 776 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 ACAP2Q15057 778 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 TYSND1Q2T9J0 566 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 CFAP157Q5JU67 520 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 FAM45BPQ6NSW5 357 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 TRIM67Q6ZTA4 783 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 FRMD7Q6ZUT3 714 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 FAM45AQ8TCE6 357 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 NRG4Q8WWG1 115 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 IFT43Q96FT9 208 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 UNKQ9C0B0 810 aaKnown RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 POMKQ9H5K3 350 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 WDR55Q9H6Y2 383 aaPredicted RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 GPAMQ9HCL2 828 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 MTF2Q9Y483 593 aaPredicted RBP14.01□□□□□ -0.17
HOXC4-202ENST00000430889 ARL5AQ9Y689 179 aa14.01□□□□□ -0.17
HOXC4-202ENST00000430889 GFRA2O00451 464 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 PENKP01210 267 aaPredicted RBP14□□□□□ -0.17
HOXC4-202ENST00000430889 RBP1P09455 135 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 CCDC166P0CW27 439 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 CD1EP15812 388 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 CORO1AP31146 461 aaKnown RBP14□□□□□ -0.17
HOXC4-202ENST00000430889 ALDH7A1P49419 539 aaKnown RBP14□□□□□ -0.17
HOXC4-202ENST00000430889 CCL23P55773 120 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 PRAMEP78395 509 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 GALNT1Q10472 559 aaPredicted RBP14□□□□□ -0.17
HOXC4-202ENST00000430889 GALNT3Q14435 633 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 PTPRCAPQ14761 206 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 CYTH1Q15438 398 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 RALGPS1Q5JS13 557 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 TPGS2Q68CL5 300 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 CXorf57Q6NSI4 855 aaKnown RBP14□□□□□ -0.17
HOXC4-202ENST00000430889 SETD3Q86TU7 594 aaPredicted RBP14□□□□□ -0.17
HOXC4-202ENST00000430889 LDB1Q86U70 411 aaPredicted RBP14□□□□□ -0.17
HOXC4-202ENST00000430889 DENND1CQ8IV53 801 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 OR13C4Q8NGS5 318 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 OR6P1Q8NGX9 317 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 ZNF461Q8TAF7 563 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 AGR3Q8TD06 166 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 CCDC126Q96EE4 140 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 ZFRQ96KR1 1074 aaKnown RBP14□□□□□ -0.17
HOXC4-202ENST00000430889 ZNF512Q96ME7 567 aaPredicted RBP14□□□□□ -0.17
HOXC4-202ENST00000430889 RTKNQ9BST9 563 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 RNF38Q9H0F5 515 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 SUDS3Q9H7L9 328 aaPredicted RBP14□□□□□ -0.17
HOXC4-202ENST00000430889 RC3H2Q9HBD1 1191 aaKnown RBP14□□□□□ -0.17
HOXC4-202ENST00000430889 POPDC3Q9HBV1 291 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 NCKIPSDQ9NZQ3 722 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 STOML1Q9UBI4 398 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 UBA2Q9UBT2 640 aaPredicted RBP14□□□□□ -0.17
HOXC4-202ENST00000430889 AGO1Q9UL18 857 aaKnown RBP14□□□□□ -0.17
HOXC4-202ENST00000430889 YIPF1Q9Y548 306 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 SPO11Q9Y5K1 396 aa14□□□□□ -0.17
HOXC4-202ENST00000430889 A0A1B0GVM2 712 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 TCAF2A6NFQ2 919 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 VGLL3A8MV65 326 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 SDHDO14521 159 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 IPO13O94829 963 aaKnown RBP13.99□□□□□ -0.17
HOXC4-202ENST00000430889 CD160O95971 181 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 SOD2P04179 222 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 HOXB8P17481 243 aaPredicted RBP13.99□□□□□ -0.17
HOXC4-202ENST00000430889 PIK3R1P27986 724 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 EPHA3P29320 983 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 KCNC1P48547 511 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 OXCT1P55809 520 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 NFKB2Q00653 900 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 SLC34A1Q06495 639 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 SULT2A1Q06520 285 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 HERC3Q15034 1050 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 ISCA2Q86U28 154 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 MAB21L3Q8N8X9 362 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 BLOC1S5Q8TDH9 187 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 SCG3Q8WXD2 468 aaKnown RBP13.99□□□□□ -0.17
HOXC4-202ENST00000430889 HERC2P3Q9BVR0 1158 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 NUF2Q9BZD4 464 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms