RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 ITGA3P26006 1051 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 DUSP4Q13115 394 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 TAB1Q15750 504 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 LRRN4CLQ8ND94 238 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 TEX47Q8TBZ9 253 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 HDAC10Q969S8 669 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 ZFRQ96KR1 1074 aaKnown RBP15.45■□□□□ 0.06
PTPRF-206ENST00000429895 OSER1Q9NX31 292 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 ALKBH4Q9NXW9 302 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 MORF4L1Q9UBU8 362 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 EFR3BQ9Y2G0 817 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 A0A1W2PQH9 124 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 CYP3A4P08684 503 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 ELNP15502 786 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 CRYBB1P53674 252 aaPredicted RBP15.45■□□□□ 0.06
PTPRF-206ENST00000429895 SEC13P55735 322 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 INHBEP58166 350 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 RGMBQ6NW40 437 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 TNS4Q8IZW8 715 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 COMMD9Q9P000 198 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 AP3M1Q9Y2T2 418 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 REREQ9P2R6 1566 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 CEP170BQ9Y4F5 1589 aaPredicted RBP15.45■□□□□ 0.06
PTPRF-206ENST00000429895 SSNA1O43805 119 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 RBMXL2O75526 392 aaKnown RBP15.45■□□□□ 0.06
PTPRF-206ENST00000429895 CST1P01037 141 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 H2AFXP16104 143 aaPredicted RBP15.45■□□□□ 0.06
PTPRF-206ENST00000429895 UBE2R2Q712K3 238 aaPredicted RBP15.45■□□□□ 0.06
PTPRF-206ENST00000429895 VANGL1Q8TAA9 524 aaPredicted RBP15.45■□□□□ 0.06
PTPRF-206ENST00000429895 GAS2L1Q99501 681 aaPredicted RBP15.45■□□□□ 0.06
PTPRF-206ENST00000429895 HTATIP2Q9BUP3 242 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 CNPPD1Q9BV87 410 aa15.45■□□□□ 0.06
PTPRF-206ENST00000429895 ATP6AP2A0A1C7CYW4 349 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 ATP6AP2O75787 350 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 OTCP00480 354 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 COX4I1P13073 169 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 STAT5AP42229 794 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 SUZ12Q15022 739 aaKnown RBP15.44■□□□□ 0.06
PTPRF-206ENST00000429895 TSHZ1Q6ZSZ6 1077 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 ANKS1BQ7Z6G8 1248 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 HSFY1Q96LI6 401 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 CORO2BQ9UQ03 480 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.44■□□□□ 0.06
PTPRF-206ENST00000429895 FAM92AA1XBS5 289 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 SCAMP1O15126 338 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 OR4Q2P0C623 313 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 DBTP11182 482 aaKnown RBP15.44■□□□□ 0.06
PTPRF-206ENST00000429895 VSIG10LQ86VR7 867 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 MYO19Q96H55 970 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 INTS7Q9NVH2 962 aaKnown RBP15.44■□□□□ 0.06
PTPRF-206ENST00000429895 CARNS1A5YM72 827 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 IGFALSP35858 605 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 ST3GAL1Q11201 340 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 ITGADQ13349 1161 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 SF1Q15637 639 aaKnown RBP15.44■□□□□ 0.06
PTPRF-206ENST00000429895 ULK2Q8IYT8 1036 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 NRSN1Q8IZ57 195 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 DAW1Q8N136 415 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 CLHC1Q8NHS4 586 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 PPCDCQ96CD2 204 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 PWWP2AQ96N64 755 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 TRNT1Q96Q11 434 aaKnown RBP15.44■□□□□ 0.06
PTPRF-206ENST00000429895 BRINP2Q9C0B6 783 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 ZNF222Q9UK12 451 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 PSMD10O75832 226 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 CYP1A2P05177 515 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 ITGA2P17301 1181 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 MANFP55145 182 aaKnown RBP15.44■□□□□ 0.06
PTPRF-206ENST00000429895 OR5B17Q8NGF7 314 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 HIPK3Q9H422 1215 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 KIAA1522Q9P206 1035 aaPredicted RBP15.44■□□□□ 0.06
PTPRF-206ENST00000429895 QSOX1O00391 747 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 APODP05090 189 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 TNK2Q07912 1038 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 PHYKPLQ8IUZ5 450 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 MTMR9Q96QG7 549 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 NXF3Q9H4D5 531 aaKnown RBP15.44■□□□□ 0.06
PTPRF-206ENST00000429895 SGK2Q9HBY8 427 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 MCUBQ9NWR8 336 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 HECAQ9UBI9 543 aaPredicted RBP15.44■□□□□ 0.06
PTPRF-206ENST00000429895 PHF11Q9UIL8 331 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 ACTL7BQ9Y614 415 aa15.44■□□□□ 0.06
PTPRF-206ENST00000429895 PSMG1O95456 288 aa15.43■□□□□ 0.06
PTPRF-206ENST00000429895 PTPN5P54829 565 aa15.43■□□□□ 0.06
PTPRF-206ENST00000429895 PSME3P61289 254 aa15.43■□□□□ 0.06
PTPRF-206ENST00000429895 MRPS5P82675 430 aaKnown RBP15.43■□□□□ 0.06
PTPRF-206ENST00000429895 MZT2BQ6NZ67 158 aa15.43■□□□□ 0.06
PTPRF-206ENST00000429895 NEK5Q6P3R8 708 aa15.43■□□□□ 0.06
PTPRF-206ENST00000429895 IQCF2Q8IXL9 164 aa15.43■□□□□ 0.06
PTPRF-206ENST00000429895 CD101Q93033 1021 aa15.43■□□□□ 0.06
PTPRF-206ENST00000429895 OR52E6Q96RD3 313 aa15.43■□□□□ 0.06
PTPRF-206ENST00000429895 CAB39LQ9H9S4 337 aa15.43■□□□□ 0.06
PTPRF-206ENST00000429895 GPC6Q9Y625 555 aaPredicted RBP15.43■□□□□ 0.06
PTPRF-206ENST00000429895 A0A087WXM4 84 aa15.43■□□□□ 0.06
PTPRF-206ENST00000429895 RFXANKO14593 260 aa15.43■□□□□ 0.06
PTPRF-206ENST00000429895 RASGRP1O95267 797 aa15.43■□□□□ 0.06
PTPRF-206ENST00000429895 RFX4Q33E94 735 aa15.43■□□□□ 0.06
PTPRF-206ENST00000429895 GPR135Q8IZ08 494 aa15.43■□□□□ 0.06
PTPRF-206ENST00000429895 Q96MT0 163 aa15.43■□□□□ 0.06
PTPRF-206ENST00000429895 SETBP1Q9Y6X0 1596 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms