RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 KELP23276 732 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 CFHR1Q03591 330 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 BCL2L1Q07817 233 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 IL10RBQ08334 325 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 NCAPHQ15003 741 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 AFMIDQ63HM1 303 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 PCSK4Q6UW60 755 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 IRF2BP2Q7Z5L9 587 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 TSEN2Q8NCE0 465 aaKnown RBP14.98□□□□□ -0.01
MSH5-208ENST00000429846 SPOCK2Q92563 424 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 TSACCQ96A04 125 aaPredicted RBP14.98□□□□□ -0.01
MSH5-208ENST00000429846 CCDC74AQ96AQ1 378 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 SNRNP25Q9BV90 132 aaKnown RBP14.98□□□□□ -0.01
MSH5-208ENST00000429846 SLC39A8Q9C0K1 460 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 HSD3B7Q9H2F3 369 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 GPATCH2LQ9NWQ4 482 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 SIRPGQ9P1W8 387 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 OR1A2Q9Y585 309 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 MGAQ8IWI9 3026 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 GOLGA6L22H0YM25 854 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 TNFRSF10CO14798 259 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 PRPSAP2O60256 369 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 TNFSF15O95150 251 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 HOXC4P09017 264 aaPredicted RBP14.97□□□□□ -0.01
MSH5-208ENST00000429846 PNLIPP16233 465 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 ERCC2P18074 760 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 CCKBRP32239 447 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 RGRP47804 291 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 HCAR3P49019 387 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 RENBPP51606 427 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 AP1S1P61966 158 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 RALGDSQ12967 914 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 LIPIQ6XZB0 460 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 DPPA4Q7L190 304 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 RD3Q7Z3Z2 195 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 ZNF605Q86T29 641 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 ZSWIM9Q86XI8 627 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 ARHGAP12Q8IWW6 846 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 ZNF843Q8N446 348 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 LZTR1Q8N653 840 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 PAF1Q8N7H5 531 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 GPR156Q8NFN8 814 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 OR56A4Q8NGH8 313 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 PDXPQ96GD0 296 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 TMEM74Q96NL1 305 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 STRADBQ9C0K7 418 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 KCTD5Q9NXV2 234 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 TAS2R14Q9NYV8 317 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 PCDHGA7Q9Y5G6 932 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 SCINQ9Y6U3 715 aa14.97□□□□□ -0.01
MSH5-208ENST00000429846 SCN8AQ9UQD0 1980 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 CFAP46Q8IYW2 2715 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 ZNF462Q96JM2 2506 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 A0A1W2PQ67 120 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 TMEM191CA6NGB0 347 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 K7ENP7 123 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 DFFAO00273 331 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 PLD2O14939 933 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 RECQL5O94762 991 aaPredicted RBP14.96□□□□□ -0.01
MSH5-208ENST00000429846 RPLP0P05388 317 aaKnown RBP14.96□□□□□ -0.01
MSH5-208ENST00000429846 GZMAP12544 262 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 NFKBIAP25963 317 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 TRIM23P36406 574 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 ANP32AP39687 249 aaKnown RBP14.96□□□□□ -0.01
MSH5-208ENST00000429846 INHBCP55103 352 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 CA9Q16790 459 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 TMCO4Q5TGY1 634 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 INO80CQ6PI98 192 aaPredicted RBP14.96□□□□□ -0.01
MSH5-208ENST00000429846 FOXR1Q6PIV2 292 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 ARFGAP1Q8N6T3 406 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 NPWQ8N729 165 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 TRIM11Q96F44 468 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 ZNF599Q96NL3 588 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 PSKH2Q96QS6 385 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 PEBP4Q96S96 227 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 KCTD15Q96SI1 283 aaPredicted RBP14.96□□□□□ -0.01
MSH5-208ENST00000429846 NAT10Q9H0A0 1025 aaKnown RBP14.96□□□□□ -0.01
MSH5-208ENST00000429846 ZWILCHQ9H900 591 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 EPB41L5Q9HCM4 733 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.96□□□□□ -0.01
MSH5-208ENST00000429846 SEPT3Q9UH03 358 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 PCSK1NQ9UHG2 260 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 RABGEF1Q9UJ41 708 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 APPL1Q9UKG1 709 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 ACSL6Q9UKU0 697 aa14.96□□□□□ -0.01
MSH5-208ENST00000429846 UNC13CQ8NB66 2214 aa14.96□□□□□ -0.02
MSH5-208ENST00000429846 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.95□□□□□ -0.02
MSH5-208ENST00000429846 A0A1W2PQM1 296 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 LRRC53A6NM62 1247 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 TMCO5BA8MYB1 307 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 PDE2AO00408 941 aaPredicted RBP14.95□□□□□ -0.02
MSH5-208ENST00000429846 TRAFD1O14545 582 aaPredicted RBP14.95□□□□□ -0.02
MSH5-208ENST00000429846 ATMINO43313 823 aaPredicted RBP14.95□□□□□ -0.02
MSH5-208ENST00000429846 SOCS5O75159 536 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 MBD3O95983 291 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 PRKCGP05129 697 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 PLA2G2AP14555 144 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 GLB1P16278 677 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 MIPP30301 263 aa14.95□□□□□ -0.02
MSH5-208ENST00000429846 HSPA9P38646 679 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms