RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 GLP2RO95838 553 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 PENKP01210 267 aaPredicted RBP13.75□□□□□ -0.21
THBS3-202ENST00000428962 ACVRL1P37023 503 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 CCR10P46092 362 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 GALNT1Q10472 559 aaPredicted RBP13.75□□□□□ -0.21
THBS3-202ENST00000428962 CYLC2Q14093 348 aaPredicted RBP13.75□□□□□ -0.21
THBS3-202ENST00000428962 PDCD2Q16342 344 aaPredicted RBP13.75□□□□□ -0.21
THBS3-202ENST00000428962 ZNF789Q5FWF6 425 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 SH2D4BQ5SQS7 431 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 LRRC43Q8N309 656 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 KDM1BQ8NB78 822 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 GPR150Q8NGU9 434 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 GIPC2Q8TF65 315 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 SGF29Q96ES7 293 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 UBXN10Q96LJ8 280 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 LENG8Q96PV6 779 aaPredicted RBP13.75□□□□□ -0.21
THBS3-202ENST00000428962 TRMOQ9BU70 441 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 PPP1R12CQ9BZL4 782 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 VCX3BQ9H321 246 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 S100A14Q9HCY8 104 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 GTSE1Q9NYZ3 720 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 SEPT3Q9UH03 358 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 TBKBP1A7MCY6 615 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 A8MT66 165 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 PITPNM1O00562 1244 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 S1PR4O95977 384 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 GALTP07902 379 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 OGNP20774 298 aaKnown RBP13.74□□□□□ -0.21
THBS3-202ENST00000428962 TUFMP49411 452 aaKnown RBP13.74□□□□□ -0.21
THBS3-202ENST00000428962 RGS19P49795 217 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 GATMP50440 423 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 NUDT2P50583 147 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 MTTPP55157 894 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 CDH4P55283 916 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 MRPS35P82673 323 aaKnown RBP13.74□□□□□ -0.21
THBS3-202ENST00000428962 GNA12Q03113 381 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 IRGCQ6NXR0 463 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 RSPO2Q6UXX9 243 aaPredicted RBP13.74□□□□□ -0.21
THBS3-202ENST00000428962 SNX32Q86XE0 403 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 RNF135Q8IUD6 432 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 KYQ8NBH2 561 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 CEP70Q8NHQ1 597 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 BRSK1Q8TDC3 778 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 BLOC1S5Q8TDH9 187 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 MAELQ96JY0 434 aaKnown RBP13.74□□□□□ -0.21
THBS3-202ENST00000428962 ZNF184Q99676 751 aaPredicted RBP13.74□□□□□ -0.21
THBS3-202ENST00000428962 MGME1Q9BQP7 344 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 POPDC3Q9HBV1 291 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 PDE5AO76074 875 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 NDST3O95803 873 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 BAG2O95816 211 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 ATF6P18850 670 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 ARSDP51689 593 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 PRMT2P55345 433 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 KLC1Q07866 573 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 IHHQ14623 411 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 RFTN1Q14699 578 aaPredicted RBP13.74□□□□□ -0.21
THBS3-202ENST00000428962 KLHDC10Q6PID8 442 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 SDCCAG8Q86SQ7 713 aaPredicted RBP13.74□□□□□ -0.21
THBS3-202ENST00000428962 FAM126BQ8IXS8 530 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 PLD4Q96BZ4 506 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 PPP1R36Q96LQ0 422 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 ZNF512Q96ME7 567 aaPredicted RBP13.74□□□□□ -0.21
THBS3-202ENST00000428962 CATSPER2Q96P56 530 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 TTC1Q99614 292 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 CINPQ9BW66 212 aaPredicted RBP13.74□□□□□ -0.21
THBS3-202ENST00000428962 OSBPL1AQ9BXW6 950 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 UNKQ9C0B0 810 aaKnown RBP13.74□□□□□ -0.21
THBS3-202ENST00000428962 ZBTB26Q9HCK0 441 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 ACSS2Q9NR19 701 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 UBA2Q9UBT2 640 aaPredicted RBP13.74□□□□□ -0.21
THBS3-202ENST00000428962 BCAP29Q9UHQ4 241 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 POMPQ9Y244 141 aa13.74□□□□□ -0.21
THBS3-202ENST00000428962 TTC24A2A3L6 582 aaPredicted RBP13.73□□□□□ -0.21
THBS3-202ENST00000428962 CD3EAPO15446 510 aaKnown RBP13.73□□□□□ -0.21
THBS3-202ENST00000428962 SMIM24O75264 130 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 CLDN11O75508 207 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 ZMPSTE24O75844 475 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 WISP3O95389 354 aaPredicted RBP13.73□□□□□ -0.21
THBS3-202ENST00000428962 CRTAMO95727 393 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 GOT2P00505 430 aaKnown RBP13.73□□□□□ -0.21
THBS3-202ENST00000428962 FDXRP22570 491 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 KCNQ1P51787 676 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 OXCT1P55809 520 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 NFKB2Q00653 900 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 SULT2A1Q06520 285 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 MAPRE2Q15555 327 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 IL31Q6EBC2 164 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 SLC8B1Q6J4K2 584 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 BNC2Q6ZN30 1099 aaPredicted RBP13.73□□□□□ -0.21
THBS3-202ENST00000428962 DHDDSQ86SQ9 333 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 FBXO22Q8NEZ5 403 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 CCDC124Q96CT7 223 aaKnown RBP13.73□□□□□ -0.21
THBS3-202ENST00000428962 MOCOSQ96EN8 888 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 LBHD1Q9BQE6 289 aaPredicted RBP13.73□□□□□ -0.21
THBS3-202ENST00000428962 CATSPERZQ9NTU4 200 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 MARCH4Q9P2E8 410 aaPredicted RBP13.73□□□□□ -0.21
THBS3-202ENST00000428962 MTRRQ9UBK8 725 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 VPS28Q9UK41 221 aa13.73□□□□□ -0.21
THBS3-202ENST00000428962 SDHDO14521 159 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms