RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 WNT3AP56704 352 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 ETF1P62495 437 aaKnown RBP14.63□□□□□ -0.07
SGCE-204ENST00000428696 CDK18Q07002 472 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 SF3A2Q15428 464 aaKnown RBP14.63□□□□□ -0.07
SGCE-204ENST00000428696 SIX1Q15475 284 aaPredicted RBP14.63□□□□□ -0.07
SGCE-204ENST00000428696 ZNF284Q2VY69 593 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 TRIM61Q5EBN2 209 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 ALG1LQ6GMV1 187 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 KIAA1161Q6NSJ0 714 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 LAYNQ6UX15 382 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 ALYREFQ86V81 257 aaKnown RBP14.63□□□□□ -0.07
SGCE-204ENST00000428696 TRIM69Q86WT6 500 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 RASGEF1CQ8N431 466 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 PIH1D2Q8WWB5 315 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 DNASE2BQ8WZ79 361 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 FAM131CQ96AQ9 280 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 SLC6A18Q96N87 628 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 APOL2Q9BQE5 337 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 MLPHQ9BV36 600 aaPredicted RBP14.63□□□□□ -0.07
SGCE-204ENST00000428696 GBA3Q9H227 469 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 EBF2Q9HAK2 575 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 VPS45Q9NRW7 570 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 CA5BQ9Y2D0 317 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 ZKSCAN5Q9Y2L8 839 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 PCDHGA5Q9Y5G8 931 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 SLCO1B1Q9Y6L6 691 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 USP34Q70CQ2 3546 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 FRYLO94915 3013 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 GPR179Q6PRD1 2367 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 GOLGA6CA6NDK9 693 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 GOLGA6BA6NDN3 693 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 E7EVH7 732 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 SPINT1O43278 529 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 GCATO75600 419 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 AGTP01019 485 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 ZSCAN5DPP0CG00 497 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 GOLGA6DP0CG33 693 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 CYP2A6P11509 494 aaPredicted RBP14.62□□□□□ -0.07
SGCE-204ENST00000428696 AKT2P31751 481 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 VIPR1P32241 457 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 PAFAH1B1P43034 410 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 GEMP55040 296 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 C21orf59P57076 290 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 CLDN2P57739 230 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 SPARCL1Q14515 664 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 DUOXA1Q1HG43 343 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 PARP6Q2NL67 630 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 TMEM52BQ4KMG9 183 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 HS1BP3Q53T59 392 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 PAPD7Q5XG87 772 aaKnown RBP14.62□□□□□ -0.07
SGCE-204ENST00000428696 TCEAL6Q6IPX3 200 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 PRELID2Q8N945 189 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 ACTRT1Q8TDG2 376 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 TCEAL3Q969E4 200 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 SCRN2Q96FV2 425 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 OXNAD1Q96HP4 312 aaPredicted RBP14.62□□□□□ -0.07
SGCE-204ENST00000428696 FICDQ9BVA6 458 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 GTPBP2Q9BX10 602 aaKnown RBP14.62□□□□□ -0.07
SGCE-204ENST00000428696 NUSAP1Q9BXS6 441 aaKnown RBP14.62□□□□□ -0.07
SGCE-204ENST00000428696 TM9SF3Q9HD45 589 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 SEMA4GQ9NTN9 838 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 GOLGA6AQ9NYA3 693 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 SUSD2Q9UGT4 822 aa14.62□□□□□ -0.07
SGCE-204ENST00000428696 AAR2Q9Y312 384 aaKnown RBP14.62□□□□□ -0.07
SGCE-204ENST00000428696 A0A1B0GTW7 788 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 NPIPB15A6NHN6 443 aaPredicted RBP14.61□□□□□ -0.07
SGCE-204ENST00000428696 PRR5-ARHGAP8B1AHC4 643 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 ANKRD66B4E2M5 251 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 PRAMEF26H0Y7S4 382 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 WNT9AO14904 365 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 METTL18O95568 372 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 PRLP01236 227 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 ITGAVP06756 1048 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 C6P13671 934 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 MMP12P39900 470 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 DPP6P42658 865 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 AFF3P51826 1226 aaKnown RBP14.61□□□□□ -0.07
SGCE-204ENST00000428696 ATXN3P54252 364 aaPredicted RBP14.61□□□□□ -0.07
SGCE-204ENST00000428696 IRX4P78413 519 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 TEAD4Q15561 434 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 TRIP13Q15645 432 aaPredicted RBP14.61□□□□□ -0.07
SGCE-204ENST00000428696 OASLQ15646 514 aaKnown RBP14.61□□□□□ -0.07
SGCE-204ENST00000428696 QPCTQ16769 361 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 DPPA4Q7L190 304 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 TSPAN33Q86UF1 283 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 KIAA2013Q8IYS2 634 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 CEP76Q8TAP6 659 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 LRRC45Q96CN5 670 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 C1QTNF7Q9BXJ2 289 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 SHOC2Q9UQ13 582 aa14.61□□□□□ -0.07
SGCE-204ENST00000428696 DRG1Q9Y295 367 aaKnown RBP14.61□□□□□ -0.07
SGCE-204ENST00000428696 A0A0J9YYE9 177 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 A0A1B0GVT2 93 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 CES2O00748 559 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 LATO43561 262 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 FZD6O60353 706 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 USP12O75317 370 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 NDST3O95803 873 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 TRBC1P01850 177 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 HNRNPA2B1P22626 353 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms