RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CNTNAP1P78357 1384 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 TAF4O00268 1085 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 DEAF1O75398 565 aaPredicted RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 VAPBO95292 243 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 TRAPPC2P0DI81 140 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 TRAPPC2BP0DI82 140 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 CXCR2P25025 360 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 POLR2IP36954 125 aaKnown RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 SLC7A2P52569 658 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 SLC14A2Q15849 920 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 BROXQ5VW32 411 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 BPIFB6Q8NFQ5 453 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 OR13J1Q8NGT2 312 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 PPWD1Q96BP3 646 aaKnown RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 ZNF486Q96H40 463 aaPredicted RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 HERC2P3Q9BVR0 1158 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 ATP11BQ9Y2G3 1177 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 PABPN1LA6NDY0 278 aaKnown RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 RPS6KA4O75676 772 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 NPPAP01160 153 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 SLC35E2BP0CK96 405 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 EIF6P56537 245 aaKnown RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 FOXM1Q08050 763 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 BNIP2Q12982 314 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 PEX6Q13608 980 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 ARHGEF6Q15052 776 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 ATP6AP1Q15904 470 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 WDR45BQ5MNZ6 344 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 CCNJQ5T5M9 372 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 GRTP1Q5TC63 336 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 TAF2Q6P1X5 1199 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 SAPCD2Q86UD0 394 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 DDIASQ8IXT1 998 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 TDRD5Q8NAT2 981 aaKnown RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 BEST2Q8NFU1 509 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 ZSCAN18Q8TBC5 510 aaPredicted RBP5.17□□□□□ -1.58
RIF1-203ENST00000428287 MUL1Q969V5 352 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 OSBPL10Q9BXB5 764 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 LHPPQ9H008 270 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 ACAD9Q9H845 621 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 PKD2L2Q9NZM6 624 aa5.17□□□□□ -1.58
RIF1-203ENST00000428287 B4GAT1O43505 415 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 TIPRLO75663 272 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 SEMA3DO95025 777 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 CHRM3P20309 590 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 GRIA1P42261 906 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 RPS9P46781 194 aaKnown RBP5.16□□□□□ -1.58
RIF1-203ENST00000428287 ATP4BP51164 291 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 TPTEP56180 551 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 CCDC14Q49A88 953 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 TREML2Q5T2D2 321 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 NDUFAF5Q5TEU4 345 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 ZYG11AQ6WRX3 759 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 IDO2Q6ZQW0 420 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 VN1R5Q7Z5H4 357 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 CMC1Q7Z7K0 106 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 PHYKPLQ8IUZ5 450 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 CALML6Q8TD86 181 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 QKIQ96PU8 341 aaKnown RBP eCLIP5.16□□□□□ -1.588e-12■■■■■ 36.7
RIF1-203ENST00000428287 FEM1AQ9BSK4 669 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 COA1Q9GZY4 146 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 C12orf10Q9HB07 376 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 AGO4Q9HCK5 861 aaKnown RBP5.16□□□□□ -1.58
RIF1-203ENST00000428287 COL20A1Q9P218 1284 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 MRPL11Q9Y3B7 192 aaKnown RBP5.16□□□□□ -1.58
RIF1-203ENST00000428287 GOLGA8IPA6NC78 632 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 GOLGA8JA6NMD2 632 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 K7ERI5 159 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 DYRK3O43781 588 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 KCNH1O95259 989 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 WISP3O95389 354 aaPredicted RBP5.16□□□□□ -1.58
RIF1-203ENST00000428287 POLBP06746 335 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 CD6P30203 668 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 ANO4Q32M45 955 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 ARFGEF3Q5TH69 2177 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 TTC23Q5W5X9 447 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 SPPL2BQ8TCT7 592 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 BSNDQ8WZ55 320 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 NT5C3BQ969T7 300 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 APBA2Q99767 749 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 HAPLN2Q9GZV7 340 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 ANAPC2Q9UJX6 822 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 GGA1Q9UJY5 639 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 KIAA1257Q9ULG3 409 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 THSD7AQ9UPZ6 1657 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 FADS2P1A8MWK0 482 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 CLIC3O95833 236 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 NAGAP17050 411 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 IMPDH1P20839 514 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 EVA1CP58658 441 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 YIF1BQ5BJH7 314 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 C11orf74Q86VG3 221 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 CHPFQ8IZ52 775 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 ARL10Q8N8L6 244 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 SPERTQ8NA61 448 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 TXNDC5Q8NBS9 432 aaKnown RBP5.16□□□□□ -1.58
RIF1-203ENST00000428287 C17orf80Q9BSJ5 609 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 NXF2Q9GZY0 626 aaKnown RBP5.16□□□□□ -1.58
RIF1-203ENST00000428287 SYTL2Q9HCH5 934 aa5.16□□□□□ -1.58
RIF1-203ENST00000428287 TJP2Q9UDY2 1190 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms