RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 NOD2Q9HC29 1040 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 NT5MQ9NPB1 228 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 MBNL1Q9NR56 388 aaKnown RBP9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 GPR27Q9NS67 375 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 UCKL1Q9NWZ5 548 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 INTUQ9ULD6 942 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 NEUROG3Q9Y4Z2 214 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 HS3ST3A1Q9Y663 406 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 PI4KAP42356 2102 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 DOCK4Q8N1I0 1966 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 SOWAHDA6NJG2 315 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 A8MX80 341 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 H3BM21 787 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 TRIM38O00635 465 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 TRAFD1O14545 582 aaPredicted RBP9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 ST8SIA5O15466 376 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 SOCS5O75159 536 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 PIAS2O75928 621 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 NEBLO76041 1014 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 LDOC1O95751 146 aaPredicted RBP9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 CPP00450 1065 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 PCCBP05166 539 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 ELFN1P0C7U0 828 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 NME1P15531 152 aaKnown RBP9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 CR2P20023 1033 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 COMTP21964 271 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 ARHGAP25P42331 645 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 MAGEA1P43355 309 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 NOP2P46087 812 aaKnown RBP9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 THOP1P52888 689 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 PFN3P60673 137 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 ITKQ08881 620 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 NSUN2Q08J23 767 aaKnown RBP eCLIP9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 TRAF2Q12933 501 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 LRRC14Q15048 493 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 SPA17Q15506 151 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 ODF2Q5BJF6 829 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 TIGD7Q6NT04 549 aaPredicted RBP9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 DHRS13Q6UX07 377 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 LRRC49Q8IUZ0 686 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 TP53I13Q8NBR0 393 aaPredicted RBP9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 ZNF548Q8NEK5 533 aaPredicted RBP9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 CENPTQ96BT3 561 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 ZNF830Q96NB3 372 aaPredicted RBP9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 SEMA3CQ99985 751 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 GOLPH3Q9H4A6 298 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 B4GALT6Q9UBX8 382 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 TFR2Q9UP52 801 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 PCDHGC4Q9Y5F7 938 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 KNL1Q8NG31 2342 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 CEP295Q9C0D2 2601 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 ADAMTS9Q9P2N4 1935 aa9.27□□□□□ -0.93
RFX3-AS1-202ENST00000427722 PLXNA2O75051 1894 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 SPTY2D1-AS1A0A0U1RR47 76 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 APOL1O14791 398 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 HTRA2O43464 458 aaPredicted RBP9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 SIGLEC6O43699 453 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 RFPL3O75679 317 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 RECQL5O94762 991 aaPredicted RBP9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 DKK1O94907 266 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 MX2P20592 715 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 DGKAP23743 735 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 KDELR1P24390 212 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 CYLC1P35663 651 aaPredicted RBP9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 SLC1A1P43005 524 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 ACADVLP49748 655 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 HNRNPKP61978 463 aaKnown RBP eCLIP9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 DYNLT1P63172 113 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 DSC2Q02487 901 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 EIF2B5Q13144 721 aaKnown RBP9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 PTK2BQ14289 1009 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 TCEA2Q15560 299 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 IFI16Q16666 785 aaKnown RBP9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 ST3GAL2Q16842 350 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 WSCD2Q2TBF2 565 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 HS1BP3Q53T59 392 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 LRRC38Q5VT99 294 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 MACC1Q6ZN28 852 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 DPPA4Q7L190 304 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 MARCH9Q86YJ5 346 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 RFX6Q8HWS3 928 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 DCP2Q8IU60 420 aaKnown RBP9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 RHOT1Q8IXI2 618 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 RBFAQ8N0V3 343 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 SLC25A45Q8N413 288 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 CCNYQ8ND76 341 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 MAML1Q92585 1016 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 GATA6Q92908 595 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 IFT43Q96FT9 208 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 RNF157Q96PX1 679 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 POLR1EQ9GZS1 481 aaKnown RBP9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 LUC7LQ9NQ29 371 aaKnown RBP9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 RBM22Q9NW64 420 aaKnown RBP eCLIP9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 DTLQ9NZJ0 730 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 APOBEC3BQ9UH17 382 aaKnown RBP9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 KLF15Q9UIH9 416 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 MSRB2Q9Y3D2 182 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 OR1A2Q9Y585 309 aa9.26□□□□□ -0.93
RFX3-AS1-202ENST00000427722 PCDHA13Q9Y5I0 950 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms